PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678299082
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family C2H2
Protein Properties Length: 462aa    MW: 52060.9 Da    PI: 7.9606
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678299082genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.83.9e-051234123
               EEETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
               + C+ C+k+F++  ++  H+r+H
  678299082 12 FICNLCNKRFPSGKSFGAHMRSH 34
               89********************9 PP
2zf-C2H212.20.00057401423123
                EEETTTTEEESSHHHHHHHHHHT CS
    zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                + Cp C+++F++   L  H r+H
  678299082 401 HACPFCDRVFKNGQALGGHKRSH 423
                67******************999 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139124.4E-81135IPR007087Zinc finger, C2H2
PROSITE profilePS501579.911239IPR007087Zinc finger, C2H2
SuperFamilySSF576678.03E-101234No hitNo description
SMARTSM003550.00321234IPR015880Zinc finger, C2H2-like
PROSITE patternPS0002801434IPR007087Zinc finger, C2H2
SuperFamilySSF576678.03E-10100127No hitNo description
PROSITE profilePS501579.993105132IPR007087Zinc finger, C2H2
PfamPF139124.6E-8105129IPR007087Zinc finger, C2H2
SMARTSM003550.21105127IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280107127IPR007087Zinc finger, C2H2
SuperFamilySSF576671.78E-6327349No hitNo description
PROSITE profilePS501579.224327354IPR007087Zinc finger, C2H2
PfamPF139121.4E-8327351IPR007087Zinc finger, C2H2
SMARTSM003556.1327349IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280329349IPR007087Zinc finger, C2H2
SuperFamilySSF576671.78E-6396423No hitNo description
PfamPF139122.6E-8400423IPR007087Zinc finger, C2H2
SMARTSM003550.029401423IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.743401433IPR007087Zinc finger, C2H2
PROSITE patternPS000280403423IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 462 aa     Download sequence    Send to blast
MLMEEEGQRS RFICNLCNKR FPSGKSFGAH MRSHEVANSG ESEERFAAKK KLLSVTEEEE  60
EDQLMRDSWE FAELGEGQSG GYGLRENPKK TWRAADSTPT PSLPRICKQC GKAFQSLKAL  120
CGHMACHSEK ERVPKDDISW TSENNKMVMD GFSDTESSDR KNLSSSRRSS VNKKRMKPVE  180
DSPFSSLFEI DGQEQVEVAR CLMLLSRDQM NRGSGYSAVE SSDNNSVVLE TKSSSIDMKI  240
SKQKQLGCGA QTSEEFSKMK KIAMEEDSDS GYFLDENADT ESESEYRVQV RDSNFKRFSV  300
TESSKVTAAK TGKNAPDSES VPKRSKYECF NCKKTFNSYQ ALGGHRPCHR RLNSNADRYE  360
SDENSPEDDR AYKLAEPLRH NKAASKASCD KKATLKKNRV HACPFCDRVF KNGQALGGHK  420
RSHFINAHEG TRNRATLIKH DQLDLNLPAP EESEDGVHGR FR
Cis-element ? help Back to Top
SourceLink
PlantRegMap678299082
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011070953.11e-130zinc finger protein 91-like
TrEMBLA0A2Z7B3141e-124A0A2Z7B314_9LAMI; Uncharacterized protein
STRINGMigut.L01205.1.p1e-116(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13432255
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.12e-50C2H2-like zinc finger protein