PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678296929
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family Trihelix
Protein Properties Length: 327aa    MW: 36872.2 Da    PI: 8.8332
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678296929genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix53.65.9e-1725105272
   trihelix   2 WtkqevlaLiearremeerlrrg..........klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt 72 
                W+ qe+++Li+a++ +eer  r+          k ++ +W++v +++++ g+ rs++qC++kw+nl +++kk++e e++ +
  678296929  25 WSVQETMVLIKAKKMDEERRMRRmggegggersKPAELRWKWVEDYCWRYGCLRSQNQCNDKWDNLMRDFKKVREYERRTA 105
                *************987777775323333333336999***************************************99864 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.8181791IPR017877Myb-like domain
PfamPF138373.0E-1224102No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MDLTVVNQAG SSNADAVRDY RKGNWSVQET MVLIKAKKMD EERRMRRMGG EGGGERSKPA  60
ELRWKWVEDY CWRYGCLRSQ NQCNDKWDNL MRDFKKVREY ERRTAAGEKG EEEESRRSYW  120
IIDKNERKDN NLPSNMLPEI YEALVEAVDR KAQRSTAVGV GSNAAVLQSP LAASPVKQYP  180
NNQQTHQPLL LPPPPPPTEL TGFQFPPNPS PTPQNQSTKN AKMSSNHSDS ETSEYSDSAA  240
KRRKTSVDEI EAAIAKSGAM IAQAIRSCEE RVERQHRESV MLNERRLKIE ESNAETNRQG  300
INGLVDAINK LANSILALAS QSSSSTK
Cis-element ? help Back to Top
SourceLink
PlantRegMap678296929
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011096764.11e-108trihelix transcription factor ASR3 isoform X2
TrEMBLS8CS241e-115S8CS24_9LAMI; Uncharacterized protein
STRINGSolyc02g069390.1.11e-101(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA48212236
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.11e-70Trihelix family protein