PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678295939
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family bHLH
Protein Properties Length: 341aa    MW: 36826.9 Da    PI: 6.9361
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678295939genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.58.6e-12270315655
                HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
        HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                +++Er RR ri +++ +L++l P+     +k  s a++L +Av+YIk+Lq
  678295939 270 SIAERMRRTRISEKMKKLQQLFPNI----DKQTSTADMLDLAVQYIKDLQ 315
                689*********************5....588*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.469264314IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.96E-15267324IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.14E-12268319No hitNo description
Gene3DG3DSA:4.10.280.101.1E-13269324IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.7E-12270320IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.0E-9270315IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MFMSEAEISV NRSSCFLGSG FVDQKQLMES QVLHQSPGLA RYRSAPSSLL AAVVDSNTNS  60
SSGDESEALF SAFWNGSRDL DHKGGDDSSY MKQEIRTESG TPGSGAMFFN GVAGGGANGS  120
YSVGVNGSGL LRQSSSPAGL FTGFGAMGNY SAHRGNSSAS DINISSSPSI SSSRIMPSIL  180
ENTSVYLCES LQSRNEEYGA GFNDLKRDHD GHPKVFSTFS GLHDQSGETL KSSTVLVHGE  240
AEKLGFLQFE PDVVPCQIRA KRGCATHPRS IAERMRRTRI SEKMKKLQQL FPNIDKQTST  300
ADMLDLAVQY IKDLQRQVQT LTETKVNCIC SSQPRATSNQ I
Cis-element ? help Back to Top
SourceLink
PlantRegMap678295939
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011087339.11e-110transcription factor bHLH130
TrEMBLA0A2G9FZD61e-100A0A2G9FZD6_9LAMI; Uncharacterized protein
STRINGMigut.B01333.1.p7e-82(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA44352238
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.13e-40bHLH family protein