PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 678294508
Organism
Utricularia gibba
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Utricularia
Family NAC
Protein Properties Length: 271aa    MW: 29968.3 Da    PI: 7.0396
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
678294508genomeUGSPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM32.13.3e-1033796128
        NAM  96 kgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                +g+++g+kk+Lv+y   g+++k+ekt+Wvmh+y+l
  678294508   3 SGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 37 
                57899*********5547999999*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100516.644156IPR003441NAC domain
SuperFamilySSF1019411.96E-12256IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MSSGKQKGCK KILVLYTNFG KNRKPEKTNW VMHQYHLGKH EEEKEGELVV SKIFYQTQPR  60
QCNWSERSSG GAAVSDSGGS SSSQRDEFST PATAGANLAA LPSFVASDIH RHFGFLPVSF  120
PKTFDEGDRI GEASMGREAG GGACEDLTGE PRLHQHHHQI TTAFNVHRSS RSLSRIISPT  180
SMPMILDQDR SYDVPPIILP HRTFQSPPPP SPAPPQHHKL GGSSTSGLEE IIMGCTSSDI  240
KEESSMANRQ EAEWLKYSSF WPEPDDQNRH G
Cis-element ? help Back to Top
SourceLink
PlantRegMap678294508
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020549346.12e-97uncharacterized protein LOC105162027 isoform X2
TrEMBLA0A4D9BG543e-91A0A4D9BG54_SALSN; Uncharacterized protein
STRINGXP_006475352.14e-87(Citrus sinensis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA40572444
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56620.12e-27NAC domain containing protein 99