PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 676785192
Organism
Sisymbrium irio
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
Family bZIP
Protein Properties Length: 601aa    MW: 66087.6 Da    PI: 4.8645
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
676785192genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.11.1e-14150209362
                XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                + kr  r+++NRe+A+ sRqRKk ++eeL++kvk+L++  ++L ++++    e a+l+ +
  676785192 150 DEKRSARLIRNRESAQLSRQRKKHYVEELQDKVKNLQSVITDLNSKVSYFMAENAALRLK 209
                56999*****************************************99999999888766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.4E-15148212IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.231150207IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.38E-11152207No hitNo description
Gene3DG3DSA:1.20.5.1701.3E-15152208No hitNo description
PfamPF001707.3E-13152210IPR004827Basic-leucine zipper domain
CDDcd147042.33E-20153204No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 601 aa     Download sequence    Send to blast
MAEPVVEKNH TDDPPSFSSE FDFLPPSFDY NFYSSSSDVR FSIDGDYELT FDSIEDLYFP  60
PDNGFTPVLG GISGDVSEAT VASSRDSGKV VVVDQRFKEE EKEEEAKTFT TKRKKESEEE  120
EDTSEESRSS KYMRSDEDGV VEEEEDADDD EKRSARLIRN RESAQLSRQR KKHYVEELQD  180
KVKNLQSVIT DLNSKVSYFM AENAALRLKV GPGTAFSWPH HHQPLAYPWM PFPAYMVKQK  240
GSQVVPLLPI PRLKPQQSVG KVNKSQAKTN KVVASVSVLG LLFCLFLFGA LAPIVELSYR  300
GINAVCYGEY GQIRARVLDV SVNSSGRGSD QGVGRNVSET DNSAPLGNGS ELLVASLYVP  360
RDEKLVKLDG NLIIHSVLAS EKDLASETKS EGKSGVAATV KGISPALRIS DSTRTRDLSE  420
HLNSEKPKAL SSSGYDDSKE KLNSTTTGNG EMQQWFREGV AGPMFSSGMC TEVFQFDVST  480
TSAAIIPASQ ATQQPKDTTD THKGQSNRRI LRGGLPVSES NLTKDQNSSS KENFRETKSF  540
PSMVVSVLVD PREGSDRDID GTTGGTKTLS PVFIDVLVDG VQYVTYSCVL PRPEIPHLVT  600
T
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator involved in stress responses. {ECO:0000250|UniProtKB:O22208}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap676785192
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006402962.10.0bZIP transcription factor 49
SwissprotQ9LXX40.0BZP49_ARATH; bZIP transcription factor 49
TrEMBLV4L2960.0V4L296_EUTSA; Uncharacterized protein
STRINGXP_006402962.10.0(Eutrema salsugineum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM2027756
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56660.11e-175basic region/leucine zipper motif protein 49
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]