PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 676783408 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
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Family | B3 | ||||||||
Protein Properties | Length: 2350aa MW: 265002 Da PI: 8.7147 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 35.3 | 2.1e-11 | 165 | 235 | 25 | 98 |
TT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 25 ehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ehg+ ke++ +tl ++g + +l r ++g++ l+kGWk+F+ angLk+gD++++++++ +++++++++f 676783408 165 EHGSFKEGHLFITLSGKNGTKLVANL--RESRGSMRLGKGWKDFAIANGLKAGDSFTLEVIW-KDKTPMLSLFG 235 55666677778999999*********..*********************************9.88889998886 PP | |||||||
2 | B3 | 47.2 | 4e-15 | 358 | 437 | 11 | 93 |
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 lk g +lp f++++g++k+ +++tl +++r+W +l+ ++ksg++ l+kGW eF+kangLk g ++++ +++ +++++ 676783408 358 LKFGKQYLPLWFTRKNGLDKP--RKITLLGKDSRKWVAELRQENKSGGFRLGKGWIEFAKANGLKIGNSFTLDSIWE-NETPM 437 4446679************65..58***********************************************98885.44455 PP | |||||||
3 | B3 | 40.6 | 4.6e-13 | 486 | 565 | 3 | 86 |
EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 + ++++ k + l+lp +f+++++++k + ++tl ++g +W +l k+g ++++ G k+F++ang+++g++++++++g 676783408 486 SLTLTPEDVKDCELILPSQFMKDNDINKLG--KITLLGKKGTKWFGYL--LTKDGIVTMGCGLKGFCEANGVETGESFILEFIG 565 5566777778899***********999765..8***********9999..999999************************9765 PP | |||||||
4 | B3 | 55 | 1.5e-17 | 775 | 863 | 6 | 98 |
..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 + + +++rl+lp +f +e+g++k++ ++ l +g +W +l ++gr++ ++GWk+FvkangLk g + +++l++ +++++v+ ++ 676783408 775 LAPVDVRHCRLRLPMQFSRENGINKPG--KIYLLGNDGSKWLANL-LLESRGRMTVGDGWKSFVKANGLKIGGSYTLELNW-EDTTPVLCLCP 863 55667789**************99776..8***************.6777788899***********************99.88889999886 PP | |||||||
5 | B3 | 65.5 | 7.8e-21 | 929 | 1023 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 f++ ++++d+l++grl+lp +f++e++++k++ ++tl ++g +W l ++gr+ l+kGWk+F+kangLk+gD+++++ ++ ++ ++v++++r 676783408 929 FLTLTITPDSLRHGRLRLPLEFMTENSMNKPG--DITLLGKDGAKWLASLL-LERRGRMCLGKGWKDFAKANGLKTGDSITLESIW-EDSTPVLSLLR 1022 778899********************999766..7***************6.55556778***********************999.77778999888 PP S CS B3 99 k 99 + 676783408 1023 T 1023 6 PP | |||||||
6 | B3 | 60.6 | 2.7e-19 | 1253 | 1336 | 11 | 98 |
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +++rl+lp +f++++g++k++ ++ l ++g +W +l ++gr++l++GWk+FvkangLk+gD++ +k+++ +++++v++++ 676783408 1253 VRNCRLRLPMQFTRDNGINKPG--KVYLLGKDGSKWLANL-LLESRGRMTLGDGWKSFVKANGLKTGDSFGLKVNW-EDTTPVLSLCP 1336 5789*************99776..8***************.68888899************************988.89999999986 PP | |||||||
7 | B3 | 60.5 | 2.9e-19 | 1406 | 1498 | 1 | 97 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 f++ ++++d+l++grl+lp +f+ +++++k++ ++tl ++ +W v l ++gr+ l+kGWk+F+kan+Lk+gD+++++ ++ +++ +v++++ 676783408 1406 FLTLTITPDSLRHGRLRLPLQFMMDNSMNKPG--DITLLGKDDVKWLVSLL-LERRGRMSLGKGWKDFAKANRLKTGDSITLESIW-EDEIPVLSLV 1498 778899********************999766..7***************5.55556789***********************998.5554666655 PP | |||||||
8 | B3 | 51.7 | 1.6e-16 | 1559 | 1639 | 4 | 89 |
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 +ltp+dv ++++l lp +f++++g++k++ ++t+ +sg +W ++ +g++ l++GWk+F++ang+ +g+++v++l+ +++ 676783408 1559 TLTPEDV-RNCNLHLPSQFMRANGIIKPG--KITMLGRSGMKWFAYV--LSEDGTVALGNGWKGFCEANGVMVGESFVLELIPNED 1639 4555555.5677*************9776..7***************..99999**************************996655 PP | |||||||
9 | B3 | 33.2 | 9.2e-11 | 1642 | 1713 | 16 | 94 |
EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 16 lvlpkkfaeeh..ggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 ++p +f++++ gg+ e+ + +l++ +s +W+vk+ ++ +l++GW+eF+ an+L+ g +v+ +++g++ f +v 676783408 1642 HMIPSDFFSKYieGGS-VEK-KAVLKSdSSDITWKVKM------NGPILSDGWREFAMANNLQIGGVVLVRYEGDMVF--HV 1713 48**********7444.343.4555553888*******......4569************************999888..54 PP | |||||||
10 | B3 | 41.1 | 3.1e-13 | 1831 | 1921 | 1 | 97 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 f++ ++p d+ + + l+lpk f++e+g++k++ ++ l ++g + l r ++g + l+kGWk+FvkangL++g ++kl++ +++++v++++ 676783408 1831 FITFTLPRDYVSISSLSLPKLFLRENGINKPG--EVYLLGKDGLKLPTSL-LRDNKGIMSLGKGWKDFVKANGLESGF--TLKLIW-EDTTPVLSLC 1921 67778899999999*************99766..8***************.566667799****************95..566668.6777777766 PP | |||||||
11 | B3 | 56.3 | 5.9e-18 | 1974 | 2069 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 f++ ++++++ +++rl+l k+f++e+g++k++ +tl ++g + + kl +k ++ ++l++GW +F++angLk gD++++kl++ +++++v++++ 676783408 1974 FVTLTITPSSVRQSRLSLLKTFTKENGINKPG--VITLLGRDGMKHQTKLLLDKVKQIMYLGSGWIGFAEANGLKIGDSFTLKLIW-EDTNPVLSLCP 2068 677788899999999************99776..7***************99**********************************.89999999986 PP S CS B3 99 k 99 + 676783408 2069 T 2069 5 PP | |||||||
12 | B3 | 56.8 | 4.1e-18 | 2121 | 2215 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 f +v+++++ l+s+r++lpkkf++e+g++k++ ++ l ++ W kl ++ k+gr+ l++GW +F++an+ k g+fv+++ ++ +++++++k++r 676783408 2121 FMTVTITPNILRSNRMRLPKKFVRENGLNKPG--MINLLGKDDTMWIAKL-VKEKDGRMNLGDGWTDFAEANDFKPGEFVTLESIW-EDETPMIKFLR 2214 788999***********************766..8***************.677888899***********************999.88889***999 PP S CS B3 99 k 99 k 676783408 2215 K 2215 7 PP | |||||||
13 | B3 | 42.2 | 1.4e-13 | 2253 | 2343 | 5 | 98 |
-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE- CS B3 5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfr 98 ++++ + ++l+lp +f++++ ++k + ++t+ e+ + + +l ++g +vl++GW eF++ang+k g++++++++++ +++++ +k+++ 676783408 2253 TLTPEDVRACMLILPSQFLKANAINKLG--KITILGENKMELSAYL--LSRDGIVVLEDGWDEFCEANGVKLGESFTLEFTNEqDKTSPILKFCS 2343 45556666789***********999766..7999999999999999..999999*************************9988899999999886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.40.330.10 | 1.9E-8 | 39 | 109 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 1.9E-11 | 42 | 129 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 1.12E-10 | 46 | 129 | No hit | No description |
PROSITE profile | PS50863 | 6.569 | 47 | 146 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 3.4E-13 | 48 | 131 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 6.8E-8 | 48 | 109 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 1.9E-5 | 151 | 237 | IPR003340 | B3 DNA binding domain |
SuperFamily | SSF101936 | 8.44E-12 | 163 | 233 | IPR015300 | DNA-binding pseudobarrel domain |
Pfam | PF02362 | 8.0E-10 | 165 | 234 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 4.1E-9 | 174 | 231 | IPR015300 | DNA-binding pseudobarrel domain |
PROSITE profile | PS50863 | 10.236 | 176 | 237 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 2.5E-15 | 340 | 441 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 3.34E-17 | 344 | 444 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 3.78E-14 | 347 | 440 | No hit | No description |
SMART | SM01019 | 4.8E-17 | 348 | 444 | IPR003340 | B3 DNA binding domain |
PROSITE profile | PS50863 | 12.464 | 348 | 444 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 3.0E-14 | 349 | 438 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 1.8E-12 | 477 | 565 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 1.1E-13 | 480 | 567 | IPR015300 | DNA-binding pseudobarrel domain |
SMART | SM01019 | 4.8E-9 | 484 | 577 | IPR003340 | B3 DNA binding domain |
PROSITE profile | PS50863 | 10.01 | 484 | 577 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 1.5E-11 | 484 | 565 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 4.41E-9 | 488 | 565 | No hit | No description |
Gene3D | G3DSA:2.40.330.10 | 1.3E-20 | 762 | 868 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 8.83E-20 | 766 | 866 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 2.72E-14 | 768 | 863 | No hit | No description |
SMART | SM01019 | 2.0E-27 | 770 | 865 | IPR003340 | B3 DNA binding domain |
PROSITE profile | PS50863 | 13.987 | 770 | 865 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 1.9E-17 | 770 | 864 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 9.5E-21 | 920 | 1029 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 2.75E-22 | 925 | 1026 | IPR015300 | DNA-binding pseudobarrel domain |
PROSITE profile | PS50863 | 15.876 | 929 | 1024 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 3.03E-18 | 929 | 1022 | No hit | No description |
SMART | SM01019 | 2.1E-31 | 929 | 1024 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 4.6E-20 | 929 | 1023 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 3.9E-22 | 1237 | 1342 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 3.53E-21 | 1241 | 1341 | IPR015300 | DNA-binding pseudobarrel domain |
PROSITE profile | PS50863 | 14.48 | 1243 | 1338 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 3.1E-25 | 1243 | 1338 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 2.23E-15 | 1247 | 1336 | No hit | No description |
Pfam | PF02362 | 1.5E-18 | 1252 | 1337 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 7.0E-19 | 1404 | 1504 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 1.41E-20 | 1405 | 1498 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 2.68E-17 | 1406 | 1499 | No hit | No description |
SMART | SM01019 | 5.8E-31 | 1406 | 1501 | IPR003340 | B3 DNA binding domain |
PROSITE profile | PS50863 | 14.762 | 1406 | 1501 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 3.3E-18 | 1406 | 1499 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 1.0E-17 | 1548 | 1638 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 1.14E-18 | 1551 | 1637 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 9.03E-14 | 1554 | 1638 | No hit | No description |
PROSITE profile | PS50863 | 11.942 | 1555 | 1652 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 1.6E-18 | 1555 | 1643 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 2.5E-15 | 1559 | 1641 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 1.75E-9 | 1629 | 1714 | No hit | No description |
SuperFamily | SSF101936 | 6.87E-11 | 1642 | 1718 | IPR015300 | DNA-binding pseudobarrel domain |
Gene3D | G3DSA:2.40.330.10 | 3.4E-12 | 1643 | 1718 | IPR015300 | DNA-binding pseudobarrel domain |
SMART | SM01019 | 0.004 | 1644 | 1719 | IPR003340 | B3 DNA binding domain |
PROSITE profile | PS50863 | 9.573 | 1660 | 1719 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 1.5E-13 | 1828 | 1920 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 7.46E-13 | 1829 | 1922 | No hit | No description |
SuperFamily | SSF101936 | 3.14E-14 | 1829 | 1921 | IPR015300 | DNA-binding pseudobarrel domain |
PROSITE profile | PS50863 | 10.898 | 1831 | 1924 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 2.7E-19 | 1831 | 1924 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 4.6E-12 | 1831 | 1921 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 1.2E-20 | 1966 | 2075 | IPR015300 | DNA-binding pseudobarrel domain |
PROSITE profile | PS50863 | 11.97 | 1974 | 2070 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 5.2E-26 | 1974 | 2070 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 3.09E-17 | 1974 | 2068 | No hit | No description |
SuperFamily | SSF101936 | 1.55E-20 | 1974 | 2074 | IPR015300 | DNA-binding pseudobarrel domain |
Pfam | PF02362 | 3.0E-17 | 1974 | 2068 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 7.1E-20 | 2112 | 2220 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 4.71E-21 | 2117 | 2217 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 1.37E-17 | 2120 | 2214 | No hit | No description |
SMART | SM01019 | 6.8E-26 | 2121 | 2216 | IPR003340 | B3 DNA binding domain |
PROSITE profile | PS50863 | 13.775 | 2121 | 2216 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 6.8E-17 | 2121 | 2215 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 6.2E-14 | 2246 | 2342 | IPR015300 | DNA-binding pseudobarrel domain |
SuperFamily | SSF101936 | 7.85E-15 | 2248 | 2342 | IPR015300 | DNA-binding pseudobarrel domain |
PROSITE profile | PS50863 | 10.377 | 2249 | 2345 | IPR003340 | B3 DNA binding domain |
SMART | SM01019 | 1.9E-16 | 2249 | 2345 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 1.1E-12 | 2249 | 2343 | IPR003340 | B3 DNA binding domain |
CDD | cd10017 | 9.95E-10 | 2253 | 2331 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 2350 aa Download sequence Send to blast |
MKRQHPRIDE PGDNDDNMEI RRKKKAKKNN SETEVDSSSS DDSDHPCFVA LVTASNLQKD 60 ALYFPKDFTS SNVIKRDCRK IVVRDRWERS WSLNLRFNKS SDTFYIRRGN FFVFKLVENR 120 EIPLLSFYST KSINDGTQGN KNDKESCMEH LTTPIKNHLV TLTIEHGSFK EGHLFITLSG 180 KNGTKLVANL RESRGSMRLG KGWKDFAIAN GLKAGDSFTL EVIWKDKTPM LSLFGTKSTS 240 VRMQQGEHCS KASDKESVST KPNTGNKKRK AKNYREERSS NELKDTTPML SLCRTDSSSD 300 RRQQGKNYSK SSEKESVSTE PSSGNMTENA KNNKEERRDS SSTIHDCFVT LTHRHETLKF 360 GKQYLPLWFT RKNGLDKPRK ITLLGKDSRK WVAELRQENK SGGFRLGKGW IEFAKANGLK 420 IGNSFTLDSI WENETPMLTL QGECSEDRVK ENFSTQPSSG NKIREATNNI EERRDSSSAI 480 QNQFVSLTLT PEDVKDCELI LPSQFMKDND INKLGKITLL GKKGTKWFGY LLTKDGIVTM 540 GCGLKGFCEA NGVETGESFI LEFIGYIWMN TNLQSRTEES FTSNEENGGG GDHDNTALIF 600 NQPTSHFCRS TVVWRRRRRR CVAHDRRFGG EALRFSNMMF QVSDLGPSYC NIRDVAASSS 660 NNGQDKIGNI SMTKHQNTRQ EAGFSSNHCV DQDNIELPRN KKVKKNTPET KADSSSAHSC 720 FVADVSASSL HKDALFLAQD LTSSDGLKRK SHKYSPKRII SSNSSRDKRF LTFILAPVDV 780 RHCRLRLPMQ FSRENGINKP GKIYLLGNDG SKWLANLLLE SRGRMTVGDG WKSFVKANGL 840 KIGGSYTLEL NWEDTTPVLC LCPAEFSIDS SRVEGECSEA SQKESLPIRP SSKNEIDKYE 900 NRKEETSSWE REKNNLRWRD LSSASQNRFL TLTITPDSLR HGRLRLPLEF MTENSMNKPG 960 DITLLGKDGA KWLASLLLER RGRMCLGKGW KDFAKANGLK TGDSITLESI WEDSTPVLSL 1020 LRTESNSDIR QQSECSKARE KQSVFTEPSS VIKTRTAEST REESRMYPLQ RLDSSLATQN 1080 RFATSTLSPE IVRLVAHDYR IGEIVVFKDE GDMMLQVSEL RPSFCEIRDV LAPNSNNGQE 1140 NISSMVIKMH PHMRNEAGFP SYDGGQYNIE LPRKKKVKNN PEKEPDTSSH HSCLVHVTAS 1200 NLHSDALHLP KDFTSLDGIK IKRRKKYTPT QIVSSYSSSE KQLATFILAP IDVRNCRLRL 1260 PMQFTRDNGI NKPGKVYLLG KDGSKWLANL LLESRGRMTL GDGWKSFVKA NGLKTGDSFG 1320 LKVNWEDTTP VLSLCPAECS RESREGGGCL EASEKEPLPV EPSSVKEISK DVNNEDENSE 1380 EESRSWVREK NHLIWKHSTS PGHSRFLTLT ITPDSLRHGR LRLPLQFMMD NSMNKPGDIT 1440 LLGKDDVKWL VSLLLERRGR MSLGKGWKDF AKANRLKTGD SITLESIWED EIPVLSLVRV 1500 ESSNDGDQSE SSKQSLSTGP ISGNKTRKAV NNIEGSSRSW ELERRDSSSA IQNRIVILTL 1560 TPEDVRNCNL HLPSQFMRAN GIIKPGKITM LGRSGMKWFA YVLSEDGTVA LGNGWKGFCE 1620 ANGVMVGESF VLELIPNEDT NHMIPSDFFS KYIEGGSVEK KAVLKSDSSD ITWKVKMNGP 1680 ILSDGWREFA MANNLQIGGV VLVRYEGDMV FHVSYSCENS PDIQPTSNND DGKCLLRKHS 1740 HPRTDVGDLP KNKRVKTNSN ETERETPLQS FCPTESVSSR RQQDCSEEED IERESSEDEP 1800 LTEIEKKKSN PKRKAVSYSS YSSYSSCHKR FITFTLPRDY VSISSLSLPK LFLRENGINK 1860 PGEVYLLGKD GLKLPTSLLR DNKGIMSLGK GWKDFVKANG LESGFTLKLI WEDTTPVLSL 1920 CCPESTCDKE EEEYFEAIKK QCNFIDLSNR VKSSNEDNNK EESRPSERVN LKQFVTLTIT 1980 PSSVRQSRLS LLKTFTKENG INKPGVITLL GRDGMKHQTK LLLDKVKQIM YLGSGWIGFA 2040 EANGLKIGDS FTLKLIWEDT NPVLSLCPTE CSIDRETGGE SSEENQKNSI PIDESNKDET 2100 RIEEGKQRNN IDSSPRSQNR FMTVTITPNI LRSNRMRLPK KFVRENGLNK PGMINLLGKD 2160 DTMWIAKLVK EKDGRMNLGD GWTDFAEAND FKPGEFVTLE SIWEDETPMI KFLRKGSNSS 2220 KANKKESIST EDTEPRTKEL ASAIQDSRFA TLTLTPEDVR ACMLILPSQF LKANAINKLG 2280 KITILGENKM ELSAYLLSRD GIVVLEDGWD EFCEANGVKL GESFTLEFTN EQDKTSPILK 2340 FCSWSKYKSD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 614 | 619 | RRRRRR |
2 | 747 | 751 | KRKSH |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 676783408 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_013628510.1 | 0.0 | PREDICTED: B3 domain-containing protein REM-like 1 | ||||
TrEMBL | A0A078G7V6 | 0.0 | A0A078G7V6_BRANA; BnaC03g27030D protein | ||||
STRING | Bo3g042160.1 | 0.0 | (Brassica oleracea) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM15079 | 16 | 19 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24690.1 | 0.0 | B3 family protein |