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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
676781968 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
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| Family |
G2-like |
| Protein Properties |
Length: 413aa MW: 46036.9 Da PI: 5.2987 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 676781968 | genome | VEGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 100.5 | 1.1e-31 | 234 | 288 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
k+r+rWt+eLHe+Fveav+qLGGse+AtPk++l+l++ + Lt++hvkSHLQkYR+
676781968 234 KQRMRWTQELHEAFVEAVNQLGGSERATPKAVLKLLNNPVLTIYHVKSHLQKYRT 288
79****************************************************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 413 aa
Download sequence Send
to blast |
MTLANDFGYS TAMSSSFSAL HATVEDRYRK FPNSFWGSSG QELMNNPVPC QVVSGGNSSG 60
YMFSSPSGFC NVSAVSTHGR NSQTQPPVST MPSDRLAMQD CLLEAQSSSL INHQPQEFAD 120
PLDEFFDFSD HVPVLNPQGE SGGVSSVELH EKSEWPNWAD QLIDNGLEAN WSELLGEPSP 180
HNPNSQRSHD LQQIPTPSSD VPRQEVIADQ QHQVVSLEAQ FSARNSSASA ATSKQRMRWT 240
QELHEAFVEA VNQLGGSERA TPKAVLKLLN NPVLTIYHVK SHLQKYRTAR YKPETSEATG 300
EPQEKKLTSI DDIKSLDMKT SVDITQALRL QMEVQKRLHE QLEIQRSLQL QIEKQGRYLQ 360
MMFEKQQKLQ ENKSSSSKTQ CNGTSAEVEF GLETQTGDQT ESASASRKRA RED
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 9e-26 | 234 | 292 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 9e-26 | 234 | 292 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 9e-26 | 234 | 292 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 9e-26 | 234 | 292 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 9e-26 | 234 | 292 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 9e-26 | 234 | 292 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 9e-26 | 234 | 292 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 9e-26 | 234 | 292 | 2 | 60 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor acting as central integrator of phosphate starvation responses (PubMed:20838596). Regulates FER1 expression upon phosphate starvation, linking iron and phosphate homeostasis (PubMed:23788639). {ECO:0000269|PubMed:20838596, ECO:0000269|PubMed:23788639}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Not up-regulated by Pi starvation. {ECO:0000269|PubMed:26586833}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK352794 | 0.0 | AK352794.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-05-N05. |
| Publications
? help Back to Top |
- Duarte JM, et al.
Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
Mol. Biol. Evol., 2006. 23(2): p. 469-78
[PMID:16280546] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Bonnot C, et al.
A chemical genetic strategy identify the PHOSTIN, a synthetic molecule that triggers phosphate starvation responses in Arabidopsis thaliana.
New Phytol., 2016. 209(1): p. 161-76
[PMID:26243630] - Aleksza D,Horváth GV,Sándor G,Szabados L
Proline Accumulation Is Regulated by Transcription Factors Associated with Phosphate Starvation.
Plant Physiol., 2017. 175(1): p. 555-567
[PMID:28765275]
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