 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
676778830 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
|
| Family |
bHLH |
| Protein Properties |
Length: 275aa MW: 30624.5 Da PI: 7.5451 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 676778830 | genome | VEGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 20.6 | 7.8e-07 | 147 | 173 | 4 | 30 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC CS
HLH 4 ahnerErrRRdriNsafeeLrellPka 30
+h+ +Er RR++i +++ L++l+P +
676778830 147 SHSLAERARREKISERMKILQDLVPGC 173
8************************87 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 275 aa
Download sequence Send
to blast |
MDPSGMMNEG APFNLSEIWQ FPMNGVSTGD SFADSSLTTA ATGHARVSHA LSQAVIEGIS 60
RAWKRGYESE SAKVVSTSNC NVHMATLGFD QDECENKRQR QKIDEVVCGN KAEAGSPETN 120
MDQKKQQLDL KKDYIHVRAR RGQATDSHSL AERARREKIS ERMKILQDLV PGCNKFLSVK 180
LEAVNSRMNP GIEVFPPKEV IILMTTKSIL YTLVLLASVV ASLYYFGKTD QFAQQAFENQ 240
EMQFGSQTRR EYSRGASPEW LHMQIGSGGF ERASS
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Involved in the control of petal size, by interfering with postmitotic cell expansion to limit final petal cell size. {ECO:0000269|PubMed:16902407}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Isoform 1 is up-regulated by PI/AP3, SEP2, SEP3 and AP1, but repressed by AG. {ECO:0000269|PubMed:16902407}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AM269753 | 1e-54 | AM269753.1 Arabidopsis thaliana mRNA for basic helix loop helix protein (bpe gene), BPE normal splice form. |
| GenBank | AM269754 | 1e-54 | AM269754.1 Arabidopsis thaliana mRNA for basic helix loop helix protein (bpe gene), BPEp splice form. |
| GenBank | AY086373 | 1e-54 | AY086373.1 Arabidopsis thaliana clone 24644 mRNA, complete sequence. |
| GenBank | BT003964 | 1e-54 | BT003964.1 Arabidopsis thaliana clone RAFL15-08-I05 (R20798) putative bHLH protein (At1g59640) mRNA, complete cds. |
| GenBank | BT005064 | 1e-54 | BT005064.1 Arabidopsis thaliana clone U20798 putative bHLH protein (At1g59640) mRNA, complete cds. |
