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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
676766244 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
|
| Family |
G2-like |
| Protein Properties |
Length: 550aa MW: 62448.1 Da PI: 7.4019 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 676766244 | genome | VEGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 106.8 | 1.2e-33 | 47 | 101 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kprl+Wtp+LHerF+eav+qLGG++kAtPkti+++m+++gLtl+h+kSHLQkYRl
676766244 47 KPRLKWTPDLHERFIEAVNQLGGADKATPKTIMKVMGIPGLTLYHLKSHLQKYRL 101
79****************************************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 550 aa
Download sequence Send
to blast |
FMYYQNQHQG KNILSSSRMH LPSERHPFLR GGNSPGDSGL ILSTDAKPRL KWTPDLHERF 60
IEAVNQLGGA DKATPKTIMK VMGIPGLTLY HLKSHLQKYR LSKNLNGQAN SGLNKIGMMT 120
MMEEKSPDAD EIQSESLSIG PQPNKNSPIS EALQMQIEVQ RRLHEQLEVQ RHLQLRIEAQ 180
GKYLQSVLEK AQETLGRQNL GPAGLEAAKV QLSELVSKVS AEYPNTSFLE PKEFQNLCPQ 240
QMQTTYPPDC SLESCLTSSE GAQKNPKMLE NNRLGLRTYL GDSTSEQKEI MEEPLFQRME 300
LTWTEGLRGN PYLSTMVSDA EQKISYSERS PARLSMGVGM HGHRGHQQGN NEYKDERFND 360
KSEDHKLESQ STKTELDLNT HVENYIERSM LLISPAEPSS LTAPPVQSTI STLKNSPALT 420
IRYTMNCFDW RVIQGDFVDF EIKDAFGVST YTPRLLSLKF KGMEMLILRD LNLERGTCFS 480
KVCMRKKLKL GKEKARGIED KDIVGCLAKG LECWTDFSKS HYHPQILYEL SGLWMDSQDF 540
KYLTFRLLPS
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 1e-20 | 46 | 103 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 1e-20 | 46 | 103 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_A | 1e-20 | 47 | 103 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 1e-20 | 47 | 103 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 1e-20 | 47 | 103 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 1e-20 | 47 | 103 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 1e-20 | 46 | 103 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 1e-20 | 46 | 103 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 1e-20 | 46 | 103 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 1e-20 | 46 | 103 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 1e-20 | 46 | 103 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 1e-20 | 46 | 103 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that may activate the transcription of specific genes involved in nitrogen uptake or assimilation (PubMed:15592750). Acts redundantly with MYR1 as a repressor of flowering and organ elongation under decreased light intensity (PubMed:21255164). Represses gibberellic acid (GA)-dependent responses and affects levels of bioactive GA (PubMed:21255164). {ECO:0000269|PubMed:21255164, ECO:0000305|PubMed:15592750}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by nitrogen deficiency. {ECO:0000269|PubMed:15592750}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HQ222089 | 0.0 | HQ222089.1 Arabidopsis thaliana myb family transcription factor (MYR2) mRNA, complete cds. |
