PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 676765022 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
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Family | bZIP | ||||||||
Protein Properties | Length: 680aa MW: 74172.1 Da PI: 6.1874 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 42.7 | 1.3e-13 | 188 | 248 | 2 | 62 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 + k+ r ++NRe+A+ sR+RKk+++eeL+ kvk++++ +L +++ e a+lk++ 676765022 188 DDEKKKVRQIRNRESAQLSRLRKKQYVEELQGKVKSMSSTIAELSGKISYVMAENAALKQQ 248 567999****************************************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 7.1E-16 | 181 | 251 | No hit | No description |
SMART | SM00338 | 4.5E-16 | 187 | 251 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.243 | 189 | 252 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 7.1E-11 | 191 | 249 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.88E-12 | 191 | 249 | No hit | No description |
CDD | cd14704 | 7.52E-16 | 192 | 243 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006990 | Biological Process | positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response | ||||
GO:0009408 | Biological Process | response to heat | ||||
GO:0005635 | Cellular Component | nuclear envelope | ||||
GO:0005654 | Cellular Component | nucleoplasm | ||||
GO:0005783 | Cellular Component | endoplasmic reticulum | ||||
GO:0016020 | Cellular Component | membrane | ||||
GO:0048471 | Cellular Component | perinuclear region of cytoplasm | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 680 aa Download sequence Send to blast |
MTESTSVIAH PPEMADLNPN MLSDSEMLSV PPLDPLFLSC SDPISMDSSI PDLDFLLDDE 60 NGGFEGLDIS FDDFFDYTFD VETPPVISEE FGSSADQSPE AIENHANLDS EGRSDSVHSQ 120 VSSQGSKSFA SGACDTVDAL SSPDPDSTSH QKSSVSKRKK ERGDSGGEYR SFKYQKSDDK 180 SAAPVEEDDE KKKVRQIRNR ESAQLSRLRK KQYVEELQGK VKSMSSTIAE LSGKISYVMA 240 ENAALKQQMA AASGAPPPVN PYMPAPPLPY QWMPYPYYPV RGYGSQTPLV PIPKLDPKPG 300 SGSRSKKPES KKNEGKSKLK KVASISFIGI LFFIFLFGTL VPFMDVNYGE GSGSFSGLSK 360 YEGRRYYDEH RGKVLMVGHG SDVRRDSRIS EGNIHPSRRS HGERDSCGGV EYNGHPNVEG 420 RPSPLSNSSE LLFASLYVPR NDGLVKIDGN LIIHSVLASE KATDFAKKNI SEKIKSEEPD 480 LSIPGALSSA LAAPDVRGNG AMLPHKPKAL SSGSPEGKKL HQWFHEGGSG TLMDYSMCTE 540 VFQFEIAPGA IVPSSASNIT REHLQNVTTH DKRMKNRRTL EGIPVSLVAS ELNITETQSN 600 KDAQNKSFHG KADTKPTSSS SMVVSVLLDP REIVDSETDR VLPSNSKSLS RIFVVVLLDS 660 VKYVTYSCVL PRSGLHLVAT |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator involved in ER stress responses. Functions as a stress sensor and transducer in ER stress signaling pathway. After proteolysis by SBT6.1 (S1P) and S2P, the N-terminal bZIP component is translocated to the nucleus, where it activates the expression and production of ER chaperones (PubMed:18156219, PubMed:18634751, PubMed:18849477, PubMed:20876872). Following ER stress, activates proteins involved in brassinosteroid (BR) signaling, which is required for stress acclimation and growth (PubMed:20876872). {ECO:0000269|PubMed:18156219, ECO:0000269|PubMed:18634751, ECO:0000269|PubMed:18849477, ECO:0000269|PubMed:20876872}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00345 | DAP | Transfer from AT3G10800 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 676765022 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By heat shock. {ECO:0000269|PubMed:18849477}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006407504.1 | 0.0 | bZIP transcription factor 28 | ||||
Swissprot | Q9SG86 | 0.0 | BZP28_ARATH; bZIP transcription factor 28 | ||||
TrEMBL | E4MX70 | 0.0 | E4MX70_EUTHA; mRNA, clone: RTFL01-21-B04 | ||||
TrEMBL | V4M298 | 0.0 | V4M298_EUTSA; Uncharacterized protein | ||||
STRING | XP_006407504.1 | 0.0 | (Eutrema salsugineum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM14397 | 18 | 22 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10800.1 | 0.0 | bZIP family protein |