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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
676764464 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
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| Family |
WOX |
| Protein Properties |
Length: 251aa MW: 28415.5 Da PI: 9.6184 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 676764464 | genome | VEGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 63 | 4.2e-20 | 13 | 72 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
+R+++tkeq++ Le+l+++ r+p+a+++++++ +l +++ ++V++WFqN++a++++
676764464 13 SRWNPTKEQITLLENLYKQgIRTPNADQIQQITGRLraygHIEGKNVFYWFQNHKARQRQ 72
8*****************99**************************************97 PP
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| 2 | Wus_type_Homeobox | 116.2 | 1.6e-37 | 11 | 74 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
+++RW+Pt+eQi++Le+lyk+G+rtPn+++iq+it +L++yG+ie+kNVfyWFQN+kaR+rqkq
676764464 11 SSSRWNPTKEQITLLENLYKQGIRTPNADQIQQITGRLRAYGHIEGKNVFYWFQNHKARQRQKQ 74
579***********************************************************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0008284 | Biological Process | positive regulation of cell proliferation |
| GO:0009942 | Biological Process | longitudinal axis specification |
| GO:0010654 | Biological Process | apical cell fate commitment |
| GO:0048825 | Biological Process | cotyledon development |
| GO:0080167 | Biological Process | response to karrikin |
| GO:0090451 | Biological Process | cotyledon boundary formation |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 251 aa
Download sequence Send
to blast |
MENEGNTGTG SSSRWNPTKE QITLLENLYK QGIRTPNADQ IQQITGRLRA YGHIEGKNVF 60
YWFQNHKARQ RQKQKQDRIA YFNRLLHKTT RFFHPPPLGC VSPYYLQQVS DHHNQHGSVY 120
RQDLRSNNVM LPSGGYEKRT TTDHKKHLSD ITTARVSMSS SSLRFDRFAL RDHGYYGEGI 180
NVNSHGRKTL PLFPLQPLDA TGDDAVGKSC FASVHDSPVT CFGDGDGRDR PFIDFFSGGS 240
SSFDNSGKEG L
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in embryonic patterning. Required for apical embryo development after fertilization. Its specific localization to the apical daughter cell of the zygote, while WOX8 is confined to the basal cell, suggests that the asymmetric division of the plant zygote separates determinants of apical and basal cell fates. {ECO:0000269|PubMed:14711878}. |
| Publications
? help Back to Top |
- Liang Z,Brown RC,Fletcher JC,Opsahl-Sorteberg HG
Calpain-Mediated Positional Information Directs Cell Wall Orientation to Sustain Plant Stem Cell Activity, Growth and Development.
Plant Cell Physiol., 2015. 56(9): p. 1855-66
[PMID:26220906] - Zhu T,Moschou PN,Alvarez JM,Sohlberg JJ,von Arnold S
WUSCHEL-RELATED HOMEOBOX 2 is important for protoderm and suspensor development in the gymnosperm Norway spruce.
BMC Plant Biol., 2016. 16: p. 19
[PMID:26786587] - Zhang Z,Tucker E,Hermann M,Laux T
A Molecular Framework for the Embryonic Initiation of Shoot Meristem Stem Cells.
Dev. Cell, 2017. 40(3): p. 264-277.e4
[PMID:28171749]
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