 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
676760412 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
|
| Family |
GeBP |
| Protein Properties |
Length: 261aa MW: 29262.4 Da PI: 8.1664 |
| Description |
GeBP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 676760412 | genome | VEGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF573 | 98.4 | 6.9e-31 | 38 | 137 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.....aksgkepsfskehdqkifelskkiW 96
lfqrl+se De++lLqG+idf+++ g +p++d+dafy f+ ++i f ++k+qlv+K+r++K+Kf + vkk + +ke++fsk+ +qk+fels+kiW
676760412 38 LFQRLFSEADELALLQGIIDFNSTSG-DPFKDTDAFYGFAASRICFAATKTQLVNKVRKMKQKFLDTVKKsldkgKGGEKEIVFSKDFEQKAFELSRKIW 136
79*******************99999.*****************************************9988775556789******************* PP
DUF573 97 g 97
g
676760412 137 G 137
8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 261 aa
Download sequence Send
to blast |
MSGETEEVKK KRKRRKTKTT EEDVKIIPEA EASKQKSLFQ RLFSEADELA LLQGIIDFNS 60
TSGDPFKDTD AFYGFAASRI CFAATKTQLV NKVRKMKQKF LDTVKKSLDK GKGGEKEIVF 120
SKDFEQKAFE LSRKIWGIEG VLPSKPRSPK DEPDITEKNV ASSPLSSGEK IVALFKEFNL 180
LRFASDESSL LGRWSMVPGP LKRALEAKLK MQADKQVEVC LDRIDLLAYA ADVILRGDNA 240
SSGVEEEKDV SAEQLESNER D
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 9 | 14 | KKRKRR |
| 2 | 9 | 15 | KKRKRRK |
| 3 | 10 | 15 | KRKRRK |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT4G25210.1 | 4e-48 | DNA-binding storekeeper protein-related transcriptional regulator |
