 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
676759030 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
|
| Family |
WRKY |
| Protein Properties |
Length: 519aa MW: 56624.7 Da PI: 6.1059 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 676759030 | genome | VEGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 98.6 | 4.1e-31 | 279 | 337 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+
676759030 279 NDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRSILITTYEGNHNHP 337
8*********************************************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 519 aa
Download sequence Send
to blast |
MFRFPVSLGG PGDNLKQTQP SDEQHHRAVM DEVDFFRSEK RDDQNIITEE THRLHVKREN 60
SRVDDDDDRS TGINTGLNLL TANTGSDESL VDDGLSVDME EKRTKCENAQ LREELKKSNE 120
ENQRLKGMLS QTTNNFNSLQ MQLVAVMRQQ EDHHHLATTE SNDKTTNKRH EAPEMVPRQF 180
IDLGLPSAEV SSDERTTVLS GSPPSLLEDS SSRPRGKRIL EIEETPATDN GWENPSKVAK 240
HNASSINANG NAIDQSAAEA TMRKARVSVR ARSEAPMLND GCQWRKYGQK MAKGNPCPRA 300
YYRCTMAVGC PVRKQVQRCA EDRSILITTY EGNHNHPLPP AAMYMASTTT AAASMLLSGS 360
TMSNQDGLMN PTNLFARTML PCSSSMATIS ASAPFPTITL DLTESASNGN SPTNNNPLMQ 420
FSQRSGLAEL NQSGLPQMMG QALYYNQQQS KFSGLQIPSQ SLNAGESVSA ATAAIAANPN 480
FAAALAAAIT SIINGSNNHQ NGNSNSSTNN VTTSSVDRQ
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Modulates phosphate homeostasis and Pi translocation by regulating PHO1 expression (PubMed:25733771). {ECO:0000250, ECO:0000269|PubMed:25733771}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | FJ384110 | 0.0 | FJ384110.1 Brassica napus cultivar Westar WRKY transcription factor 42 (WRKY42) mRNA, WRKY42-2 allele, complete cds. |
