 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
676754980 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
|
| Family |
FAR1 |
| Protein Properties |
Length: 323aa MW: 36672.3 Da PI: 6.8863 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 676754980 | genome | VEGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 93.6 | 2.4e-29 | 158 | 245 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91
fYn+YA++vGF +r+sk ++s+++g+ + r++vC+keg+r ++k++ k r+raetr+gC+a++ ++ke++gkw++tk+++eHnH+l+p
676754980 158 FYNAYATKVGFVIRVSKLSRSRHDGSPIGRQLVCNKEGYRLPSKRD--KVIRQRAETRVGCRAMILIRKENSGKWVITKFVKEHNHPLMP 245
9******************************************999..999************************************986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 323 aa
Download sequence Send
to blast |
MKNSGHTGLT GYCVPCNPYP EPAPSLSLPH HRKPKVDRRR LRPLSAGGDS PRKNSDMDFR 60
IDNGDAAGMM MGIPVELEVT TVENHNEMGE SSGQAMIEQD DESHNEIGES SGQAMPLEQD 120
EKVDPDSIPL AVADMAEVQA DEPYVGQEFE SEAAAHGFYN AYATKVGFVI RVSKLSRSRH 180
DGSPIGRQLV CNKEGYRLPS KRDKVIRQRA ETRVGCRAMI LIRKENSGKW VITKFVKEHN 240
HPLMPGRVRR GCIYDQYPNE HDKIQELMQQ LAAEKKRAAT YKRHLEMLFE QIEQHNESLT 300
KRIQHIVDNV RDLEQRDHQQ NQV
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AY058089 | 0.0 | AY058089.1 Arabidopsis thaliana AT3g59470/T16L24_20 mRNA, complete cds. |
