PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 676753078
Organism
Sisymbrium irio
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
Family SAP
Protein Properties Length: 376aa    MW: 42382.9 Da    PI: 7.313
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
676753078genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP613.16e-187237583454
        SAP  83 wravsrsdllwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdkylaaGfadGavrlfdletrlh 182
                w+avsrsd+lwq l+r++W+rt+l +dtWree+iyrhrtarnf+tr+y ++tl+fdp+dvde   +d+lsCrcl lsd ylaaGfadG+vrlf l++rlh
  676753078   2 WQAVSRSDHLWQLLSRQVWARTRLTHDTWREEFIYRHRTARNFQTRTYVHFTLNFDPSDVDE---PDSLSCRCLRLSDLYLAAGFADGTVRLFLLNSRLH 98 
                **********************************************************9998...689******************************** PP

        SAP 183 vstflpqhrdrlGrfsravsGivisdsrlvfatldGdihvavidgagaaaarrallGdvvndGalvdfaGsgrWwvGlyaGvpGrafhiWdaeteelvfv 282
                v+t++p  rdr+GrfsravsGivisd rlvfat+dGdihv +i+g+g +++r+a++Gd+vndGalvdf+G+gr+wvGl+aGvpGraf+iWd+++ee++fv
  676753078  99 VRTLRPPLRDRFGRFSRAVSGIVISDLRLVFATMDGDIHVVEINGVG-SHTRTAFVGDIVNDGALVDFTGCGRYWVGLFAGVPGRAFRIWDCNSEETTFV 197
                *********************************************88.89************************************************** PP

        SAP 283 GGsltdPeavmGWhmlteltelvGrvrvteretavaCtslrlvvfdlrnqgvvlreeeer.rGlivssldasneayvvvdsrGvatvrrvenleevcrfr 381
                GGsltd eavmGWh+ltelt+++Grvr+++ etavaCt++r++v+dlrnqgv+++e+ee+ rGliv+++da+++ayv++dsrG+a+vrrv + e+v++fr
  676753078 198 GGSLTDSEAVMGWHTLTELTTSLGRVRISGGETAVACTRWRIMVIDLRNQGVIIGEDEEQrRGLIVTGFDANDDAYVRMDSRGNAIVRRVRTQETVSEFR 297
                ******************************************************99888779************************************** PP

        SAP 382 vrg.aqrgvlgCvnggyalvyaggvlrvWeiekkegylyslrervgevnalvaddrhvavsss....dgtihlldfga 454
                v+g aqr+v+gCvn+ ++l++aggv+rvWe+e+ ++ylys+rer gev+a+vaddrhv v+ss     +tihl+dfga
  676753078 298 VSGaAQRRVMGCVNRLHTLMCAGGVVRVWEVERGGEYLYSFRERLGEVDAIVADDRHVVVASSsstaVSTIHLWDFGA 375
                ***9******************************************************998884444468*******8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF509783.6E-1166245IPR017986WD40-repeat-containing domain
Gene3DG3DSA:2.130.10.103.7E-968142IPR015943WD40/YVTN repeat-like-containing domain
Gene3DG3DSA:2.130.10.103.7E-9247373IPR015943WD40/YVTN repeat-like-containing domain
SuperFamilySSF509783.6E-11289372IPR017986WD40-repeat-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    Send to blast
MWQAVSRSDH LWQLLSRQVW ARTRLTHDTW REEFIYRHRT ARNFQTRTYV HFTLNFDPSD  60
VDEPDSLSCR CLRLSDLYLA AGFADGTVRL FLLNSRLHVR TLRPPLRDRF GRFSRAVSGI  120
VISDLRLVFA TMDGDIHVVE INGVGSHTRT AFVGDIVNDG ALVDFTGCGR YWVGLFAGVP  180
GRAFRIWDCN SEETTFVGGS LTDSEAVMGW HTLTELTTSL GRVRISGGET AVACTRWRIM  240
VIDLRNQGVI IGEDEEQRRG LIVTGFDAND DAYVRMDSRG NAIVRRVRTQ ETVSEFRVSG  300
AAQRRVMGCV NRLHTLMCAG GVVRVWEVER GGEYLYSFRE RLGEVDAIVA DDRHVVVASS  360
SSTAVSTIHL WDFGAL
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in the specification of floral identity. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in the external flower organs in association with APETALA2 and other repressors. Is required to maintain floral meristem identity in concert with AGAMOUS. Interacts also with APETALA2 to ensure the normal development of ovule.
Cis-element ? help Back to Top
SourceLink
PlantRegMap676753078
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013721150.10.0transcriptional regulator STERILE APETALA
SwissprotQ9FKH10.0SAP_ARATH; Transcriptional regulator STERILE APETALA
TrEMBLV4L0G80.0V4L0G8_EUTSA; Uncharacterized protein (Fragment)
STRINGXP_006395932.10.0(Eutrema salsugineum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM110182634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.10.0SAP family protein
Publications ? help Back to Top
  1. Li N, et al.
    STERILE APETALA modulates the stability of a repressor protein complex to control organ size in Arabidopsis thaliana.
    PLoS Genet., 2018. 14(2): p. e1007218
    [PMID:29401459]