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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
676752358 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
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Family |
M-type_MADS |
Protein Properties |
Length: 268aa MW: 30294.2 Da PI: 9.5295 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
676752358 | genome | VEGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 59.9 | 3.2e-19 | 15 | 64 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
++ ++s +++ R+++i+ KA LS+LC++ v+vi+++++g+l+++++
676752358 15 SSTSNSLTATSLRDRLKTIFRKACQLSILCQVAVCVIYYGPNGELKTWPK 64
5667788899**************************************96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 268 aa
Download sequence Send
to blast |
MMSSSSSSSS SSSSSSTSNS LTATSLRDRL KTIFRKACQL SILCQVAVCV IYYGPNGELK 60 TWPKEREIVK DMASRYNAAT KRKNSLNLNQ VLELKKVDDK KDLKKKKKKM KTKRESENVK 120 YPDWYPQQQQ RLCGFDQKIT NGNFQHPCVS NTQDHQALLS GQESGVKNHL MQQQELYGSH 180 QNMCMMNNIT NSNVLRHPFL TNTVPEEFCS GLQKNPDGDM VGRTGGSQDF PNLCSAYDES 240 RLIQTSSRPS LHQPLPNNYL LPDNSRCL
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