PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 676747594 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
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Family | bZIP | ||||||||
Protein Properties | Length: 159aa MW: 18645.9 Da PI: 7.1474 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 46.6 | 7.7e-15 | 58 | 119 | 1 | 62 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 e+e+ r +r+ +NR++A+ R+RKk ++ eLe++vk Lea+N++L +++++l+ke l+ + 676747594 58 ERESSRLKRLLRNRVSAQQARERKKVYVNELEKRVKDLEAKNTELEEKVSTLQKENHMLRHD 119 78999**************************************************9988766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00170 | 1.1E-13 | 58 | 120 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 1.7E-12 | 58 | 122 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 12.139 | 60 | 117 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 4.3E-17 | 63 | 117 | No hit | No description |
CDD | cd14704 | 4.60E-16 | 63 | 114 | No hit | No description |
SuperFamily | SSF57959 | 2.56E-13 | 63 | 117 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 65 | 80 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence Send to blast |
MNTERFTESV LRVHMKEDSD NEVGEIHDLD AGEQLLVGSD AVKLLGEGQR RRGKDPAERE 60 SSRLKRLLRN RVSAQQARER KKVYVNELEK RVKDLEAKNT ELEEKVSTLQ KENHMLRHDN 120 CYQLQIHQAE VYLALEITQS YESINDCYKK REGRKGHQE |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 676747594 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018439034.1 | 2e-65 | PREDICTED: transcription factor HY5-like | ||||
TrEMBL | A0A1J3IVF6 | 5e-43 | A0A1J3IVF6_NOCCA; Transcription factor HY5 | ||||
STRING | XP_010525968.1 | 1e-46 | (Tarenaya hassleriana) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM5691 | 27 | 49 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11260.1 | 5e-23 | bZIP family protein |