 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
676746118 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
|
| Family |
WRKY |
| Protein Properties |
Length: 345aa MW: 37791.4 Da PI: 10.1826 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 676746118 | genome | VEGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 97.8 | 7.1e-31 | 276 | 334 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D+y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +d ++++tYeg+Hnh
676746118 276 SDEYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDAMMLIVTYEGDHNHA 334
69*************************988****************************6 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0005516 | Molecular Function | calmodulin binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 345 aa
Download sequence Send
to blast |
MAVELMMSSY GGGGRVKGED GGFSSKMEDT ALREAASAGI HGVEEFLKLI GQKSQPTEEN 60
QTEITAVTDV TVNSFKKVIS LLGRSRTGHA RFRRAPATTT TTKTEEDPGG VWKTEEKPET 120
VTTVALNRQK TEQYGGSAFR VYCPTPIHRR PPLSHNHSLT KNGSSSSANG RPQEPQPPSS 180
TINFAPSPPV SATNSFMSSH RCDTDSNQMS SGFEFTNPSS QVSGSRGKPP LSSVSLKRRC 240
NSSPSSRCHC TKKRKSRVKR VIRVPAVSSK MADIPSDEYS WRKYGQKPIK GSPHPRGYYK 300
CSSVRGCPAR KHVERALDDA MMLIVTYEGD HNHALVLETH HDKTL
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 236 | 254 | KRRCNSSPSSRCHCTKKRK |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KM593132 | 0.0 | KM593132.1 Brassica oleracea var. capitata WRKY transcription factor (WRKY7) mRNA, complete cds. |
