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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 676745236 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
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Family | bZIP | ||||||||
Protein Properties | Length: 254aa MW: 29441 Da PI: 6.1448 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.6 | 4.2e-11 | 142 | 187 | 5 | 53 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 ++ +r+++NRe+ArrsR RK+ i +L++ v +L+ +N++L ++l + 676745236 142 RKRKRMESNRESARRSRMRKQSHINNLRNQVNQLDLKNRELGNQL---R 187 67899*********************************9998444...4 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 8.0E-10 | 135 | 188 | No hit | No description |
SMART | SM00338 | 1.0E-12 | 138 | 202 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.68 | 140 | 203 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.7E-9 | 142 | 186 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.38E-10 | 142 | 191 | No hit | No description |
CDD | cd14702 | 1.97E-17 | 143 | 189 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 145 | 160 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence Send to blast |
MLSTVPAFSL CEPGLVNQFS GFQTGFTPWD WEWDCCDLLS VNQLSIEPAV PSPCYGESDP 60 GLVRTNSGFD DIKTGSDESS AGFIKTKPGF DDAVSSQGIP CTQAYEPDFD DQKQWTAIGN 120 FHSGEQNHDR NKLIQPEMTD ERKRKRMESN RESARRSRMR KQSHINNLRN QVNQLDLKNR 180 ELGNQLRLVI YQLQRVNTDN NRLVAEQEIL RLRLSEMRRI LIIRQLQQQQ QWELNNRRMI 240 MTEQNPSSII DHMI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 154 | 161 | RRSRMRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 676745236 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022572841.1 | 1e-144 | basic leucine zipper 63-like | ||||
TrEMBL | A0A3N6RPC9 | 1e-147 | A0A3N6RPC9_BRACR; Uncharacterized protein | ||||
STRING | Bo7g118720.1 | 1e-142 | (Brassica oleracea) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM7855 | 18 | 40 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37730.1 | 1e-127 | basic leucine-zipper 7 |