PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 676744224
Organism
Sisymbrium irio
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
Family bZIP
Protein Properties Length: 148aa    MW: 17230.9 Da    PI: 10.41
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
676744224genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_127.47.5e-095386538
               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeL 38
               k+ +r  +NR+AA++sR +K ++++ L +k+  L
  676744224 53 KKLKRIVSNRVAAQKSRWKKVQYVDDLVKKSRDL 86
               8999***********************9998776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.001949111IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.06E-75389No hitNo description
Gene3DG3DSA:1.20.5.1703.1E-753117No hitNo description
PROSITE patternPS0003605671IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    Send to blast
MSDPSFPVPT PFRVSNSTGS QEEEKKAGYV NYEVEPGFTI RLRQNIDPAM DPKKLKRIVS  60
NRVAAQKSRW KKVQYVDDLV KKSRDLHVSL LRSQVGMAIE RKRFLESEQK ELKKCMSGWL  120
QRFISDQGEM EACRAEIERL KKKMAHMN
Cis-element ? help Back to Top
SourceLink
PlantRegMap676744224
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009122368.11e-84PREDICTED: basic leucine zipper 19 isoform X2
TrEMBLM4CYJ13e-83M4CYJ1_BRARP; Uncharacterized protein
STRINGBra009288.1-P5e-84(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM144181821
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07160.14e-58bZIP family protein