PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 676743850
Organism
Sisymbrium irio
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
Family bZIP
Protein Properties Length: 547aa    MW: 60452 Da    PI: 7.2417
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
676743850genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.77.1e-10401459563
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                kr +r   NR +A rs +RK  +i eLe kv++L++e ++L  +l  l+  +  l++++
  676743850 401 KRVKRILANRQSAARSKERKMRYIVELEHKVQTLQTEATTLSAQLTLLQRDMMGLTNQN 459
                899******************************************99998877777665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.7E-19397461IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.76399462IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.3E-11401458No hitNo description
SuperFamilySSF579591.61E-11401457No hitNo description
PfamPF001701.0E-8401458IPR004827Basic-leucine zipper domain
CDDcd147032.04E-23402451No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 547 aa     Download sequence    Send to blast
MGDTEKCNSE MMQRLHSSFG TSSSSIPKQP LSALNQQQQQ HQLELNPNFI RSTQQFSQFS  60
MPFSDSGKRV GVPPSRPNLI PPTSPYSQIR QQPGFNPGPT HSRSMSQPSS FFSFDSLPPL  120
SPSPFRDHDV SMEDRDSAAC FNNPSSLLPP PPFTRCNSTS SRVVAETLPP RKSHRRSNSD  180
IPCGFSSMPP TPLERSISGG ECADWSSKST PFVKKESSCD REGVGEREAM DDLFSAYMNL  240
ENIDVLNSSE ADDSKTGNET RDDMESSRAS GTKTNGSDTE GESSSVNESG NHNSNLTSSG  300
EKRESVKRRA GGGDIAPTTR HYRSVSVDSC FMEKLSFGDE SLKPPPSPGT MSRKVSPTNS  360
VDGNSGAAFS IEFKNGEFTA AEMKKIMAND KLAEMAMSDP KRVKRILANR QSAARSKERK  420
MRYIVELEHK VQTLQTEATT LSAQLTLLQR DMMGLTNQNN ELKFRLQAME QQARLRDALN  480
EALTGEVQRL KLAIGETSHT ESDRSKMQSL NAEMFQQLNI SQLRQQPQSQ SQQKQNGTMS  540
TKPESNE
Cis-element ? help Back to Top
SourceLink
PlantRegMap676743850
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001031810.10.0Basic-leucine zipper (bZIP) transcription factor family protein
RefseqNP_849520.10.0Basic-leucine zipper (bZIP) transcription factor family protein
TrEMBLA0A178UWI20.0A0A178UWI2_ARATH; Uncharacterized protein
TrEMBLQ8H1F00.0Q8H1F0_ARATH; Basic-leucine zipper (BZIP) transcription factor family protein
STRINGAT4G38900.10.0(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM42242757
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.30.0bZIP family protein