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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
676740624 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
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Family |
B3 |
Protein Properties |
Length: 776aa MW: 85504.3 Da PI: 7.3775 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
676740624 | genome | VEGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 57.8 | 2e-18 | 322 | 421 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96
f+kvl+ sd+++ grlvlpk +ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++lv++
676740624 322 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQPEGLPLKIQDIKGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRTE-PEGKLVMGY 419
99**************************555566778***************9989999999***9.********************654.777777776 PP
E- CS
B3 97 fr 98
++
676740624 420 RK 421
65 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 776 aa
Download sequence Send
to blast |
MESTKVCMNA QCGSTSTSGE WKRGWPMRSG ELVSLCDKCG SAYEQLIFCQ VFHAEESGWR 60 ECSSCDKRLH CGCIASRFMM ELLDNGGVTC ISCAKKSGLF SVRIFSHPCI NFLIQGCFLG 120 LGFCVNTLMQ PLLQMNVSHE SNGRDFPSSA SAEHVGSVLE RTNLKHFLHF QRIGATQSFL 180 QMKQEESLLP ARLEALRHKS EKKELQELST QPNLSISLGP ALMTSPFHDT VVDDRSKTTP 240 IFQLGPRSRQ LLPKPANSAP TAAGMEPNGS LVSQIHVARP PPEGRGKTQL LPRYWPRITD 300 QELQQLSGQY PHLSNSKIIP LFEKVLSASD AGRIGRLVLP KACAEAYFPP ISQPEGLPLK 360 IQDIKGKEWV FQFRFWPNNN SRMYVLEGVT PCIQSMQLQA GDTVTFSRTE PEGKLVMGYR 420 KATNSTAAQM FKGSSEPNLN MFSNNLSPGG DINWSKLDKP EDMAKDNLLL QPSLISARKR 480 VRNIGTKSKR LLIDSVDVLE LRLTWEEAQE LLRPPQSAKP SICTVDDHDF EEYDEPPVFG 540 KRTVFVARQT GEQEQWVQCD ACAKWRRLPV DTLLPPKWLC SDNLLDPGRA SCSAPDELTP 600 REQDTLVRLS KEFKRRRLAS SNEKLNQEQE GSALDTLANA AVTTPGGQGD TAVAATTKHP 660 RHRAGCSCIV CSQPPSGKGK HKPSCTCTTE AESIPVVEPV AGGNIDLNSD PGASRVSMMS 720 LLQAATFPLE AYLKQKAVPN TAAEQQSSDM VSTEHGSSSA AQELDRDTSV APEPMN
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional repressor of gene expression involved in embryonic pathways, such as LEC1, ABI3, and FUS3. Repressor of the sugar-inducible genes involved in the seed maturation program in seedlings. Plays an essential role in regulating the transition from seed maturation to seedling growth. Functionally redundant with VAL1/HSI2. {ECO:0000269|PubMed:17158584, ECO:0000269|PubMed:17267611}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB206554 | 0.0 | AB206554.1 Arabidopsis thaliana HSI2-L1 mRNA for transcription factor B3-EAR motif family, complete cds. |