PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 676736742
Organism
Sisymbrium irio
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
Family bZIP
Protein Properties Length: 369aa    MW: 41734.5 Da    PI: 9.2194
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
676736742genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.31.4e-072372701750
                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                A+rsR RK+++i eLe+ v++Leae ++   ele
  676736742 237 AQRSRVRKLQYISELERNVQTLEAEGSKVSAELE 270
                89***********************998888876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0075226285IPR004827Basic-leucine zipper domain
CDDcd147031.50E-14230276No hitNo description
SuperFamilySSF579592.0E-5237279No hitNo description
Gene3DG3DSA:1.20.5.1706.6E-5237275No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    Send to blast
MAGTKGSESV RSLMYPSKNA LLPPKIPFPS VSASYTEYIP CGLMGSRHGH KLSVEKTHHH  60
QRTSSESHLV EELPFWFDDL LNEPESPARK CGHRRSSSDS YAYLDVDNAT NISLTLQNDF  120
SYRNPVSSVR RGIQEFDRCK NGQDAAFYAD GSFLKQRNRQ LVASGARPGW LPSTRESVGG  180
KNMGASYMSQ DAISETKNFA ETLSHDPKRF SSEENNSNPQ PVTYEADNIK RAKQQFAQRS  240
RVRKLQYISE LERNVQTLEA EGSKVSAELE FTNQRNLILS MENKALKHRL ESIAQEKLIK  300
RLEQEVLENE IGRLRALYQQ QQLQAHKPSA THGRATSKDL ESQFSSLSLS TKDSNCRRDS  360
VSVMGQFHF
Cis-element ? help Back to Top
SourceLink
PlantRegMap676736742
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006392331.10.0uncharacterized protein At4g06598
TrEMBLA0A1J3DCY00.0A0A1J3DCY0_NOCCA; Uncharacterized protein
STRINGXP_006392331.10.0(Eutrema salsugineum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM33602444
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.20.0bZIP family protein