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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 676732780 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
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Family | bZIP | ||||||||
Protein Properties | Length: 411aa MW: 45566.1 Da PI: 5.9931 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 46.7 | 6.7e-15 | 217 | 270 | 3 | 56 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 ++k+ rr+ +NRe+ArrsR+RK++++ Le+ v eL++e ++L k+l++++ ++ 676732780 217 DVKKSRRMLSNRESARRSRRRKQEQTCDLETQVNELKGEHSSLLKQLSNMNHKY 270 789*****************************************8888887665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 9.8E-19 | 215 | 279 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 3.5E-12 | 216 | 269 | No hit | No description |
PROSITE profile | PS50217 | 10.944 | 217 | 271 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.2E-14 | 217 | 271 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.77E-11 | 218 | 269 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 222 | 237 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF12498 | 2.0E-11 | 286 | 347 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0002240 | Biological Process | response to molecule of oomycetes origin | ||||
GO:0009626 | Biological Process | plant-type hypersensitive response | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:2000693 | Biological Process | positive regulation of seed maturation | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005737 | Cellular Component | cytoplasm | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 411 aa Download sequence Send to blast |
MSSIFSIDDF SDPIWETPPS LNSDSTKVLT ADEVSQSHHE WTFEMFFEDI PSSVSSEPLR 60 HNHNAIVGVS SAQSLPSISG QNDFEDDSRF RRDHRESAPP PSSSTVVVDS DDHHRVLKNK 120 LETECATAVA LRAGSVKPED SISSPETQFQ TAQSSPLTQA SSLMTHGEVG VSSSLPAEMK 180 KSGVPMKQVT SGSSREYSDD DDLDEENETT GSLKPEDVKK SRRMLSNRES ARRSRRRKQE 240 QTCDLETQVN ELKGEHSSLL KQLSNMNHKY DDAAVGNRIL KADIETLRAK VKMAEETVKR 300 VTGMNPLLLG KSNGHNNNNY NRMPLTGNSR MDSSCIPAFQ PQSNLNHLPN PNLGVPGILP 360 PRLGNDFVPP PSLNSQTNSH LQRIRNTQNH HVSPSTNPYG WTTETQNDSV W |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 231 | 238 | RRSRRRKQ |
2 | 233 | 238 | SRRRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that binds to the C-box-like motif (5'-TGCTGACGTCA-3') and G-box-like motif (5'-CCACGTGGCC-3'), ABRE elements, of gene promoters. Binds to the 5'-ACGT-3' motif of seed storage protein (SSP) encoding gene promoters (e.g. At2S and CRU3) and promotes their expression in seeds when in complex with ABI3 and BZIP53. Involved in the defense responses to the biotrophic pathogen Hyaloperonospora parasitica and oxidative stress responses; mediates positively cell death (PubMed:12657652, PubMed:16957775, PubMed:19261733, PubMed:19531597). Promotes BZIP53-mediated response to hypoosmolarity stress that leads to POX1/PRODH1 accumulation (PubMed:16810321). {ECO:0000269|PubMed:12657652, ECO:0000269|PubMed:16810321, ECO:0000269|PubMed:16957775, ECO:0000269|PubMed:19261733, ECO:0000269|PubMed:19531597}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 676732780 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK353546 | 0.0 | AK353546.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-51-H19. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006396478.1 | 0.0 | basic leucine zipper 10 | ||||
Swissprot | O22763 | 0.0 | BZP10_ARATH; Basic leucine zipper 10 | ||||
TrEMBL | A0A1J3DSH4 | 0.0 | A0A1J3DSH4_NOCCA; Basic leucine zipper 10 | ||||
TrEMBL | A0A1J3ILZ8 | 0.0 | A0A1J3ILZ8_NOCCA; Basic leucine zipper 10 | ||||
STRING | XP_006396478.1 | 0.0 | (Eutrema salsugineum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM14871 | 17 | 20 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G02640.2 | 0.0 | bZIP family protein |
Publications ? help Back to Top | |||
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