PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 676729452
Organism
Sisymbrium irio
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
Family bZIP
Protein Properties Length: 183aa    MW: 21379 Da    PI: 7.749
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
676729452genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.14.5e-1475133563
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                +r +r+ +NRe+ArrsR RKk++ieeL++ v++L   N+ L +++ +l +   +  +e+
  676729452  75 RRVKRMVSNRESARRSRMRKKKQIEELQQQVEQLMILNHNLSEKVINLLESNHQILQEN 133
                789*****************************************999999988888887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.2E-1571135IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.0E-1172128No hitNo description
PROSITE profilePS5021711.17473136IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.75E-1175127No hitNo description
PfamPF001706.0E-1375133IPR004827Basic-leucine zipper domain
CDDcd147028.69E-1576127No hitNo description
PROSITE patternPS0003607893IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MESSVQRSHH CFDIFEGMPP QDDHLNSAFL PNANFHVQMQ SVSPNLSTRS NNNRLHFEPN  60
EENICQNEGL VPDERRVKRM VSNRESARRS RMRKKKQIEE LQQQVEQLMI LNHNLSEKVI  120
NLLESNHQIL QENSQLKEKL SSFQLLMAEM LIPARNMDGS INDRNLNHLR GETSSRTNTF  180
FGR
Cis-element ? help Back to Top
SourceLink
PlantRegMap676729452
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013670354.11e-105basic leucine zipper 43-like
TrEMBLA0A3N6T4V51e-104A0A3N6T4V5_BRACR; Uncharacterized protein
STRINGBra035957.1-P1e-104(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM61852545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60830.11e-70basic leucine-zipper 70