 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
676729154 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
|
| Family |
WRKY |
| Protein Properties |
Length: 397aa MW: 44317.9 Da PI: 6.7219 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 676729154 | genome | VEGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 95 | 5.2e-30 | 167 | 224 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
+Dgy WrKYGqK+vk+se+prsY++Ct+++C +kk ve+++ d++++ei+Y+g Hnh+k
676729154 167 NDGYGWRKYGQKQVKKSENPRSYFKCTYPNCVSKKIVETAS-DGQITEIIYKGGHNHPK 224
8***************************************9.***************85 PP
|
| 2 | WRKY | 103 | 1.7e-32 | 333 | 389 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
Dg++WrKYGqK+vkg+++prsYY+Ct++gC v+k+versaed+++v +tYeg+Hnh+
676729154 333 DGFRWRKYGQKVVKGNTNPRSYYKCTYQGCGVRKQVERSAEDERAVLTTYEGRHNHD 389
9*******************************************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009409 | Biological Process | response to cold |
| GO:0009651 | Biological Process | response to salt stress |
| GO:0070370 | Biological Process | cellular heat acclimation |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 397 aa
Download sequence Send
to blast |
MSSTSFTDLL ASSGVDCYEE DEDFRVSGSV SLYQNGGFYP ERTGSVLPKF KSAQPPPLPI 60
SPSSLGFAFS DLLDSPLLLS SSHSLISPTT GAFPFQGLNG TNSHSDFPWQ LQSQSQPSNV 120
SSALQETYAV QDLPKKQEPV PREFAAHSFG SDRQVKVPSY MVSRNSNDGY GWRKYGQKQV 180
KKSENPRSYF KCTYPNCVSK KIVETASDGQ ITEIIYKGGH NHPKPEFTKR PSGSTSISSS 240
SANARRVFNP SSVVVNEAHD QSENSSISFD YSDLEQKSFK SEYGEIEEEE EQPEMKRLKR 300
EGEDEGMSVE VSRGVKEPRV VVQTLSDIDV LIDGFRWRKY GQKVVKGNTN PRSYYKCTYQ 360
GCGVRKQVER SAEDERAVLT TYEGRHNHDV PTALRRS
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). Functions with WRKY33 as positive regulator of salt stress response and abscisic acid (ABA) signaling (PubMed:18839316). Plays a partial role in heat stress tolerance (PubMed:19125253). Functions with WRKY26 and WRKY33 as positive regulator of plant thermotolerance by partially participating in ethylene-response signal transduction pathway (PubMed:21336597). {ECO:0000250|UniProtKB:Q9SI37, ECO:0000269|PubMed:18839316, ECO:0000269|PubMed:19125253, ECO:0000269|PubMed:21336597}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By salt stress (PubMed:18839316). Induced by heat stress (PubMed:19125253). {ECO:0000269|PubMed:18839316, ECO:0000269|PubMed:19125253}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK352934 | 0.0 | AK352934.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-12-D15. |
