 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
676723328 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
|
| Family |
bHLH |
| Protein Properties |
Length: 298aa MW: 32676.6 Da PI: 6.2555 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 676723328 | genome | VEGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 29.4 | 1.4e-09 | 154 | 219 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC.................TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkas..............kapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR++i +++ L++l+P + + + + Ka +L + ++YI+sLq
676723328 154 SHSLAERARREKISERMKILQDLVPGCNksqniwivlqqrsvSLSTQVIGKALVLDEIINYIQSLQ 219
8*************************888********9999666666699***************9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 298 aa
Download sequence Send
to blast |
MDPGGMMNEA GTYNLAEIWP FPMNGGATGH SSMRSGVSFG GPNLVHQFAD SNLINNTNNC 60
GDPARMSHAL SQAVVAGIAG VRKRRDSAED KVVSASDGND ANDGESKKQK TSGCEDEVCD 120
GTAETGSMDQ KKQLPEPPKD YIHVRARRGQ ATDSHSLAER ARREKISERM KILQDLVPGC 180
NKSQNIWIVL QQRSVSLSTQ VIGKALVLDE IINYIQSLQR QVEVQPYSLC LSFLSMKIEA 240
VNSRMNPGIE VFPPKEFDQQ PFENPGMQFG SQATREYSRG ASPEWLHMQV GGGFERTS
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Involved in the control of petal size, by interfering with postmitotic cell expansion to limit final petal cell size. {ECO:0000269|PubMed:16902407}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Isoform 1 is up-regulated by PI/AP3, SEP2, SEP3 and AP1, but repressed by AG. {ECO:0000269|PubMed:16902407}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AB028232 | 3e-40 | AB028232.1 Arabidopsis thaliana ZCW32 mRNA for helix-loop-helix protein homolog, complete cds. |
| GenBank | AM269753 | 3e-40 | AM269753.1 Arabidopsis thaliana mRNA for basic helix loop helix protein (bpe gene), BPE normal splice form. |
| GenBank | AM269754 | 3e-40 | AM269754.1 Arabidopsis thaliana mRNA for basic helix loop helix protein (bpe gene), BPEp splice form. |
| GenBank | AY086373 | 3e-40 | AY086373.1 Arabidopsis thaliana clone 24644 mRNA, complete sequence. |
| GenBank | BT003964 | 3e-40 | BT003964.1 Arabidopsis thaliana clone RAFL15-08-I05 (R20798) putative bHLH protein (At1g59640) mRNA, complete cds. |
| GenBank | BT005064 | 3e-40 | BT005064.1 Arabidopsis thaliana clone U20798 putative bHLH protein (At1g59640) mRNA, complete cds. |
