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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
676721116 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
|
| Family |
GRAS |
| Protein Properties |
Length: 491aa MW: 54744.9 Da PI: 4.791 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 676721116 | genome | VEGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 327.3 | 2.9e-100 | 127 | 490 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
+e L++++++v+s++l+laq +L+rl+++ +sp+g+p+qR+a+yf+eAL + l++s + + ts+++ ++++ a k fs +sPi+ fsh+taNq
676721116 127 IEDLIRVVDCVESDELHLAQVILSRLNQRlRSPSGKPLQRAAFYFKEALDSLLTGSNRNP----NRLLTSWSEIVQKIRAIKEFSGISPIPLFSHFTANQ 222
5789************************99*************************33333....4444555569************************** PP
GRAS 101 aIleavege...ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
aIl++++++ vH++Df+i+ G+Q+++L++++a+++ + lR+T+v+++e + e++ ++e+L++fA+e++++f++++++ k++e+l+++++r+
676721116 223 AILDSLSSQsssPFVHVVDFEIGFGGQYASLMREIAEKSVSGGFLRVTAVVPEE--CAVETRLVKENLTQFASEMKIRFQIEFVLIKTFEMLSFKAIRFV 320
******99977789**************************************66..9******************************************* PP
GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe..adh.nsesFlerflealeyysalfdsleaklpreseerikvErellgrei 294
gE ++V ++ +++r l + ++++++ ++s+sPkvvv+v++e ++ + +sF ++f++ le+y+++++sl+a +p+ + ++ vE ++l+++i
676721116 321 DGERTIVLISPAIFRRL-------NGISDFVNSLRSVSPKVVVFVDSEgwTEVvGPGSFRREFVSGLEFYTMVLESLDAAAPPGDLVKKIVETFVLRQKI 413
****************9.......34567*******************665667899******************************************* PP
GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
+ +v ++ ++ r+ ++Wre++ +aG++p++ls++a qa++ll+k +++g++v +++g+lvl+W++r+Lv++SaWr
676721116 414 SAAVEMAADR---RNAGEMTWREAFCAAGMRPIQLSQFADFQAECLLEKAQVRGFHVAKRQGELVLCWHGRALVATSAWR 490
*******999...889999************************************************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 491 aa
Download sequence Send
to blast |
MKIQPSSPQD NQPSNTTNTN STDSNNNNKN QLSSMDEHVM RSMDWDSIMK ELELDDDSTP 60
NPLKTEFTPT ESAIGPLYAV DSNLPGFPDQ IQPSDFDSSD VYPAQNQTTG YGFNSLDTVD 120
NGGFDTIEDL IRVVDCVESD ELHLAQVILS RLNQRLRSPS GKPLQRAAFY FKEALDSLLT 180
GSNRNPNRLL TSWSEIVQKI RAIKEFSGIS PIPLFSHFTA NQAILDSLSS QSSSPFVHVV 240
DFEIGFGGQY ASLMREIAEK SVSGGFLRVT AVVPEECAVE TRLVKENLTQ FASEMKIRFQ 300
IEFVLIKTFE MLSFKAIRFV DGERTIVLIS PAIFRRLNGI SDFVNSLRSV SPKVVVFVDS 360
EGWTEVVGPG SFRREFVSGL EFYTMVLESL DAAAPPGDLV KKIVETFVLR QKISAAVEMA 420
ADRRNAGEMT WREAFCAAGM RPIQLSQFAD FQAECLLEKA QVRGFHVAKR QGELVLCWHG 480
RALVATSAWR F
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
