 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
676720428 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
|
| Family |
GeBP |
| Protein Properties |
Length: 309aa MW: 35256.3 Da PI: 10.1005 |
| Description |
GeBP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 676720428 | genome | VEGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF573 | 98.6 | 5.6e-31 | 73 | 172 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.....aksgkepsfskehdqkifelskkiW 96
lfqrl+se De++lLqG+idf+++ g +p++++dafy f+k++i f ++k+qlv+K+r++K+Kf + vkk + +ke++fsk+ +qk+fels+kiW
676720428 73 LFQRLFSEADELALLQGIIDFNSTSG-DPFKHTDAFYGFAKQRICFAATKTQLVNKVRKMKQKFLDTVKKsldkgKGGEKEIVFSKDFEQKAFELSRKIW 171
79*******************99999.*****************************************9988775556789******************* PP
DUF573 97 g 97
g
676720428 172 G 172
8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 309 aa
Download sequence Send
to blast |
MMKRLKTDQE VKSLGTVNET QKKKKRLRRE TTEEDMSGDN EEVKKKRKRR KTKTTEEDVK 60
IIPEAEASKQ KSLFQRLFSE ADELALLQGI IDFNSTSGDP FKHTDAFYGF AKQRICFAAT 120
KTQLVNKVRK MKQKFLDTVK KSLDKGKGGE KEIVFSKDFE QKAFELSRKI WGIEGVLPSK 180
PRSPKDEPDI PEKNVASSPL SSGEEIVALF KEFNLLRFAL DESSLLRRWS MVPGPRKRAL 240
EAKLKMQADK KVEVCLERID LLAYAADVIL RGDNASSSGH GRKNRQVSFV GVEEEKDVSA 300
EQHESNERD
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 44 | 49 | KKRKRR |
| 2 | 44 | 50 | KKRKRRK |
| 3 | 45 | 50 | KRKRRK |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT4G25210.1 | 4e-48 | DNA-binding storekeeper protein-related transcriptional regulator |
