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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
676711806 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Sisymbrieae; Sisymbrium
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Family |
M-type_MADS |
Protein Properties |
Length: 434aa MW: 48894.4 Da PI: 7.0083 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
676711806 | genome | VEGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 61.2 | 1.2e-19 | 12 | 60 | 2 | 50 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
+++++s + + + +R+ +i+KKA+EL +LC++e++vi ++++g+l +++
676711806 12 SSSSYSLAATNLNNRLSTIFKKAQELTTLCGVEACVIQYGPDGELNTWP 60
799*********************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 434 aa
Download sequence Send
to blast |
MRPPHNSSSS SSSSSYSLAA TNLNNRLSTI FKKAQELTTL CGVEACVIQY GPDGELNTWP 60 EERDKLRDLA LKYIKLDKAK RRKKSVDLYG FLNKMKEQNK MTNSAKKAKR NFEDLKYPIS 120 DHYTPHQISQ LIQSLERSYS ILQKRHFLES QNQAKTNFED HHQQSSNPTQ FTMNSALPQG 180 SGLKNNLLTQ ELCVYGQNNN SRHHSVPNTQ DYSELPAVQE SGIMKKEPYG CDQNMCLGNM 240 NINNFQHPYL SNTQGCSALP SELQASVSNY GLNQLMQMGN INNFTHPYVS NTQGCSALPS 300 ELQASVGNYG LNQLMQMGNF NHFTHPCVSN TQECSGLPSE LQASANNYGL NQLMQHERYS 360 FDQNMSTIDI TKSNVLNSVS DDFTFNFPDM PSSSLFNFDE NRPLQLHIPN DDSDISLITN 420 CQNQTGGKAI YLMK
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may function in the maintenance of the proper function of the central cell in pollen tube attraction. {ECO:0000305|PubMed:26462908}. |