 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
64358 |
| Common Name | MICPUN_64358 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas
|
| Family |
C3H |
| Protein Properties |
Length: 299aa MW: 31610.9 Da PI: 9.3304 |
| Description |
C3H family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 64358 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-CCCH | 34.1 | 4.6e-11 | 264 | 285 | 5 | 27 |
--SGGGGTS--TTTTT-SS-SSS CS
zf-CCCH 5 lCrffartGtCkyGdrCkFaHgp 27
+C ff++ G CkyGd+CkFaH+p
64358 264 PCVFFQQ-GSCKYGDTCKFAHVP 285
8999999.*************86 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 299 aa
Download sequence Send
to blast |
MDLDAMITEA EADKEEKKAR RVVVKRPARG GRGGGGGGDD LRSRLRGSDD YHGGRRGGGD 60
RWEHDRHDDR RGGGRGRAGG RGRRDDYDGG DRDRPQAETL DGWTVSDRVD ARTGKNFFAG 120
KCEGCGVDTE VPFRPVKGGN PPVCLDCNTS LKDAQGGGGP DRGGRGGRGR RGDPYGPSPK 180
MMMQQMQMMQ MQMMAMAQHM QAGGGRGGRG GRGGRGGRGA GGGRGSNVWT PDMGTSEPKP 240
ESGVAKGGKT WVREEAAADM SSTPCVFFQQ GSCKYGDTCK FAHVPARDND GNVDMGEA*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 215 | 222 | GGRGAGGG |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | CP001333 | 0.0 | CP001333.1 Micromonas sp. RCC299 chromosome 15, complete sequence. |
