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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
63448 |
Common Name | MICPUN_63448 |
Organism |
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Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas
|
Family |
GATA |
Protein Properties |
Length: 410aa MW: 44354.1 Da PI: 8.7267 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
63448 | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 23.5 | 8e-08 | 5 | 42 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgp...dgnkt.LCnaCGlyyrkkgl 35
C++Cg kTp WRrg+ g++ LCnaCG ++ +l
63448 5 CASCGGDKTP-WRRGWtvkAGERAlLCNACGQRWSAGRL 42
**********.*****999888878*********87765 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 410 aa
Download sequence Send
to blast |
MSHACASCGG DKTPWRRGWT VKAGERALLC NACGQRWSAG RLRPPVPSEP PRKKRRSSLP 60 AAAAPVPIAA RVAPPCFSPR ESEPIDDGGK EVDGADAETP RRATRRSLPS GHRRPSAGEP 120 FEGEDLPETF HPTAVPVILR QLGPGRWCRY AAFRERPPIH ERGKRTRTFE LVAEDGTALE 180 AVVGTASASS NHKYRYEVCN GLVSLAMDRM GRPFASPPTP GHLRNARDAC AWLRAVVRES 240 VSADQSFCAA VAAAVAVDAA VRREDLGGTW RALEHALGQN MWRWATDTAG ELAVARLHEM 300 VRRIDEGAGI VRGRNALTAR DAAEIVSELR CVWMRVDGGI NMETLEETGI ARAVAKIASM 360 EGNRAARETV DAASAILKEW RETQAGLVAT LENFLGSEAA HEREVSASR*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CP001331 | 0.0 | CP001331.1 Micromonas sp. RCC299 chromosome 13, complete sequence. |