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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
59938 |
Common Name | MICPUCDRAFT_59938 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas; Micromonas pusilla
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Family |
HSF |
Protein Properties |
Length: 135aa MW: 14774.9 Da PI: 10.66 |
Description |
HSF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
59938 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HSF_DNA-bind | 58.4 | 2e-18 | 19 | 114 | 1 | 102 |
HHHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHH...HSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
HSF_DNA-bind 1 aFlkklyeiledeelkeliswsengnsfvvldeeefakkvLpk...yFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94
+Fl++++++++d++++ +isw+++g+sfvv+d + + + Lpk F + +f SFv L +YgF e+++ F+++ F++gk e+l
59938 19 TFLTRTFNMVNDAKTNAIISWDKTGKSFVVHDVNALCQ-RLPKiagLF-TPSFGSFVNELSIYGFAGAIAEDGS-------YVFSNDAFQRGKPEML 106
69***********************************9.788744345.678******************9999.......**************** PP
XXXXXXXX CS
HSF_DNA-bind 95 ekikrkks 102
++i+rk++
59938 107 RTIRRKEN 114
*****985 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 135 aa
Download sequence Send
to blast |
MTTPLPWTVQ GVASAQIPTF LTRTFNMVND AKTNAIISWD KTGKSFVVHD VNALCQRLPK 60 IAGLFTPSFG SFVNELSIYG FAGAIAEDGS YVFSNDAFQR GKPEMLRTIR RKENFGRYRR 120 GSTRASAASL SMAQ*
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