 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
59514 |
| Common Name | MICPUN_59514 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas
|
| Family |
C3H |
| Protein Properties |
Length: 297aa MW: 32150.2 Da PI: 10.0149 |
| Description |
C3H family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 59514 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-CCCH | 28.5 | 2.6e-09 | 180 | 201 | 5 | 26 |
--SGGGGTS--TTTTT-SS-SS CS
zf-CCCH 5 lCrffartGtCkyGdrCkFaHg 26
Cr+++r C++G++C+F H+
59514 180 DCRHWRRERSCPRGETCPFVHV 201
7********************5 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 297 aa
Download sequence Send
to blast |
MPTGSKRKAP SAPRDPADDC ETPDVAYAHI APLLRKLAQR LGKPPGALRI WDPYYCAGGV 60
KARLGALGFG DVVNDPDADF YDVVDGSRPP PPHDICVTNP PFSGNHARRL FEYLNSRGER 120
GEGKGTTKGG PVARFVVLAP EYVHRKAWFE APRGTFFMVP SRRYSFVAAS GGRRENTAVD 180
CRHWRRERSC PRGETCPFVH VGPGIDPEGE RVAEEARRAR ANAGFSGGGG GGDGGRVTVA 240
PFDCYWHCHL GEFTRSVAAA WRQKHGRRGR VGVRMVDGVE GLPPPPDKSA KRARGG*
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | CP001327 | 0.0 | CP001327.1 Micromonas sp. RCC299 chromosome 6, complete sequence. |
