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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
493975 |
Common Name | ARALYDRAFT_493975 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family |
B3 |
Protein Properties |
Length: 242aa MW: 27764.2 Da PI: 4.7 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
493975 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 47.7 | 2.7e-15 | 124 | 214 | 2 | 83 |
EEE-..-HHHHT.T-EE--HHH.HTT.......---..--SEEEEEETTS..-EEEEEE..EEETTEEEE-TTHHHHHHHHT--.TT-EEEEE CS
B3 2 fkvltpsdvlks.grlvlpkkfaeeh.......ggkkeesktltledesg..rsWevkliyrkksgryvltkGWkeFvkangLk.egDfvvFk 83
+k+l++sdv k +rl+l+k+ ++e ++++ ++++++++ ++g +++++k+ ++++++ vlt+GWk+Fv + gL + Df++
493975 124 KKQLMSSDVDKDqCRLMLSKEQVKEKmlpfleeSEDPVKGVDVSVYGPDGavQKMKFKI--WNGDKTPVLTSGWKQFVADYGLVmTSDFIIVW 214
699*******998************9*****9977889************666666666..**********************9899998754 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 242 aa
Download sequence Send
to blast |
MATSTGETTS LTHKEVNVAA ESPEEEDTDD EEDIDDEDDT DDEVASTPLL QISQSRQKQS 60 RKREEKSDKN QPKRVKKHNI MKINIDDFSE ETLRSIEVWY KDELDPQDIF GDNEVTKQFS 120 KPIKKQLMSS DVDKDQCRLM LSKEQVKEKM LPFLEESEDP VKGVDVSVYG PDGAVQKMKF 180 KIWNGDKTPV LTSGWKQFVA DYGLVMTSDF IIVWMFRHIK TRNICFAIAN NSFPLKKKSS 240 R*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC027665 | 0.0 | AC027665.4 Genomic sequence for Arabidopsis thaliana BAC F5M15 from chromosome I, complete sequence. |
GenBank | AC069251 | 0.0 | AC069251.5 Genomic sequence for Arabidopsis thaliana BAC F2D10 from chromosome I, complete sequence. |
GenBank | CP002684 | 0.0 | CP002684.1 Arabidopsis thaliana chromosome 1 sequence. |