 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
491187 |
| Common Name | ARALYDRAFT_491187 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
|
| Family |
GATA |
| Protein Properties |
Length: 269aa MW: 30294.8 Da PI: 6.7059 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 491187 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 57.3 | 2.2e-18 | 181 | 214 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
Cs+Cgt +Tp+WR gp g+ktLCnaCG+++++ +
491187 181 CSHCGTNNTPQWRTGPVGPKTLCNACGVRFKSGR 214
*******************************987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0007623 | Biological Process | circadian rhythm |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005730 | Cellular Component | nucleolus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 269 aa
Download sequence Send
to blast |
MELWTEARAL KASLRGESTT SLKHHQLIVS EDLSRTSSLS EDFSVECFLD FSEGQKEEEE 60
LVSVSSSQEE QEQEQDCIFS SQPCIFDQLP SLPDEDVEEL EWVSRVVDDC SSPEVSLLLT 120
QTHKTKPSFS RIPVKPRTKR SRNSLTGGRV WPLVSTNHQH AATEQLRKKK QETAVVFQRR 180
CSHCGTNNTP QWRTGPVGPK TLCNACGVRF KSGRLCPEYR PADSPTFSTE IHSNLHRKVL 240
ELRKSKELGE ETGEASTKSN QVKFGSKW*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes. {ECO:0000269|PubMed:12139008}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: In leaves, less expressed in dark than in light. {ECO:0000269|PubMed:12139008}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK317163 | 0.0 | AK317163.1 Arabidopsis thaliana AT4G34680 mRNA, complete cds, clone: RAFL21-96-H07. |
| GenBank | Y13650 | 0.0 | Y13650.1 Arabidopsis thaliana mRNA for GATA transcription factor 3. |
