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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
488696 |
| Common Name | ARALYDRAFT_488696 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
|
| Family |
G2-like |
| Protein Properties |
Length: 386aa MW: 43567.6 Da PI: 6.4569 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 488696 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 107.4 | 7.9e-34 | 28 | 82 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kprl+Wtp+LHerFveav+qLGG +kAtPkti+++m+++gLtl+h+kSHLQkYRl
488696 28 KPRLKWTPDLHERFVEAVNQLGGGDKATPKTIMKVMGIPGLTLYHLKSHLQKYRL 82
79****************************************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 386 aa
Download sequence Send
to blast |
MPIHSERHPF LRGNGTGDSG LILSTDAKPR LKWTPDLHER FVEAVNQLGG GDKATPKTIM 60
KVMGIPGLTL YHLKSHLQKY RLSKNLNGQA NSSLNKTSVM TMVEENPPEV DESHSESLSI 120
GPQPTMNLPI SDALQMQIEV QRRLHEQLEV QRHLQLRIEA QGKYLQSILE KAQETLGRQN 180
LGAAGIEATK AQLSELVSKV SAEYPDSSFL EPKELQNLRH QQMQTTYPPN SSLDSCLTSS 240
EGNQKARKML DNRLGLRTYI GDSTSEQKEI MEEPFFHRME LTWAEEESLR ENNNRPYLST 300
MVNNTEPRIS SSRRSPGRLS IGVGLHEHRG GSSNNSEYTE ERFNENGEDC KLETHTRTAL 360
DLNTRDENYG TTRPKQFDLN GFSWN*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 3e-20 | 27 | 84 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 3e-20 | 27 | 84 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_A | 3e-20 | 28 | 84 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 3e-20 | 28 | 84 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 3e-20 | 28 | 84 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 3e-20 | 28 | 84 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 3e-20 | 27 | 84 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 3e-20 | 27 | 84 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 3e-20 | 27 | 84 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 3e-20 | 27 | 84 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 3e-20 | 27 | 84 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 3e-20 | 27 | 84 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that may act on the GAL1 promoter (PubMed:12008900). Acts redundantly with MYR2 as a repressor of flowering and organ elongation under decreased light intensity (PubMed:21255164). Represses gibberellic acid (GA)-dependent responses and affects levels of bioactive GA (PubMed:21255164). {ECO:0000269|PubMed:21255164, ECO:0000305|PubMed:12008900}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT003421 | 0.0 | BT003421.1 Arabidopsis thaliana transfactor-like protein (At5g18240) mRNA, complete cds. |
