PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 487538
Common NameARALYDRAFT_487538
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Family bZIP
Protein Properties Length: 151aa    MW: 16995.5 Da    PI: 9.9742
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
487538genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.35.8e-1250105560
             CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
             k+ +r ++NR+AA++sR +K ++i+ L +++ eL+++ ++L++el   +++  +l+
  487538  50 KKLKRIISNRVAAQKSRWKKVQYIDALVKRSMELQGQVSMLRSELAIASEHKRRLE 105
             899*****************************************987776666655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.7E-1242107No hitNo description
SMARTSM003384.6E-1346110IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.20948111IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.08E-1050105No hitNo description
PfamPF001706.5E-1050106IPR004827Basic-leucine zipper domain
CDDcd147032.85E-1151102No hitNo description
PROSITE patternPS0003605368IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 151 aa     Download sequence    Send to blast
MSFPVVATSF GVSQSGSQAG EKKGGYVHYE VEPGFTIRMR HDIDPTTDPK KLKRIISNRV  60
AAQKSRWKKV QYIDALVKRS MELQGQVSML RSELAIASEH KRRLENEQRQ LKECISARVQ  120
HCIDSDGVIE ECKAEIERLK KNLAPLSNLS *
Cis-element ? help Back to Top
SourceLink
PlantRegMap487538
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY9609741e-167AY960974.1 Arabidopsis thaliana activator of spomin LUC3 (ASML3) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002873298.11e-108basic leucine zipper 34
TrEMBLD7LZY21e-107D7LZY2_ARALL; DNA binding protein
STRINGfgenesh2_kg.6__672__AT5G07160.11e-108(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM144181821
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07160.14e-97bZIP family protein