 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
486765 |
| Common Name | ARALYDRAFT_486765 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
|
| Family |
ARR-B |
| Protein Properties |
Length: 432aa MW: 49394.2 Da PI: 4.8861 |
| Description |
ARR-B family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 486765 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 76.2 | 4.3e-24 | 213 | 271 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilel....mkvkgLtlehvkSHLQkYRl 55
kpr++Wt+eLH++F ave+LG ekA Pktil+ m+v+gLt+++v+SHLQkYR
486765 213 KPRMQWTTELHHKFEVAVEKLGSLEKAFPKTILKYmqeeMNVQGLTRNNVASHLQKYRQ 271
79******************************9872333589****************6 PP
|
| 2 | Response_reg | 65.8 | 2e-22 | 43 | 149 | 1 | 107 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95
vl+vd + + + +++++ + y +v+ +dgeea++ l +++ +Dl++ D mp+++Gl++l +i +e +lp+++++ ++e++ e +k+Ga
486765 43 VLLVDADSNSLLPMKNLMIQYSY-QVTKYEDGEEAMAFLMKNKqeIDLVIWDFHMPDINGLDALNTIGKEM-DLPVVIMSHDHKKETVMESIKYGAC 137
79999999999999999999***.***************666667**********************6644.7*******9999************* PP
EEEESS--HHHH CS
Response_reg 96 dflsKpfdpeel 107
dfl+Kp+++e +
486765 138 DFLVKPVSKEVI 149
******998865 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0000160 | Biological Process | phosphorelay signal transduction system |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009793 | Biological Process | embryo development ending in seed dormancy |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 432 aa
Download sequence Send
to blast |
MSVSANLLDE NSRDLRKEVP CDDEIGSPIN DDDEEFPTTS IRVLLVDADS NSLLPMKNLM 60
IQYSYQVTKY EDGEEAMAFL MKNKQEIDLV IWDFHMPDIN GLDALNTIGK EMDLPVVIMS 120
HDHKKETVME SIKYGACDFL VKPVSKEVIA VLWRHVYRKR MSKSGLDKPG ESGTVESDPD 180
EYDDLGQDNL YQSNEEGSKN SSDQKGEKPA TKKPRMQWTT ELHHKFEVAV EKLGSLEKAF 240
PKTILKYMQE EMNVQGLTRN NVASHLQKYR QNSKQKTRTH QEPQEDFFWR NAGPDATLAA 300
SNPPLSSNLN IHATASYLMN NQAAPRASYF MNNQAASPIP YPSNSCLPMN NNNYFMTKPF 360
TYIDQFQQQQ QQYHSSLNLP SMLTKQEPRH VPLSAMENFD TPMIYNSSFH FDHDEYFPPE 420
GFNNFDQIGQ N*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Putative transcriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. Functions as response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. Could directly activate some type-A response regulators in response to cytokinins (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AL162651 | 1e-164 | AL162651.1 Arabidopsis thaliana DNA chromosome 3, BAC clone F26K9. |
| GenBank | CP002686 | 1e-164 | CP002686.1 Arabidopsis thaliana chromosome 3, complete sequence. |
