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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
481772 |
| Common Name | ARALYDRAFT_481772 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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| Family |
WOX |
| Protein Properties |
Length: 243aa MW: 27962.2 Da PI: 9.3835 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 481772 | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 62.2 | 7.6e-20 | 6 | 66 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
++R+++t+eql +Lee++++ r+p+a ++++++++l +++ ++V++WFqN++a++++
481772 6 STRWCPTPEQLMILEEMYRSgIRTPNAVQIQQITAHLafygRIEGKNVFYWFQNHKARDRQ 66
58*****************99*************************************996 PP
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| 2 | Wus_type_Homeobox | 120.2 | 8.7e-39 | 5 | 67 | 2 | 64 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
a+tRW+PtpeQ++iLee+y+sG+rtPn+ +iq+ita+L+ yG+ie+kNVfyWFQN+kaR+rqk
481772 5 ASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKARDRQK 67
589***********************************************************9 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 243 aa
Download sequence Send
to blast |
MSPVASTRWC PTPEQLMILE EMYRSGIRTP NAVQIQQITA HLAFYGRIEG KNVFYWFQNH 60
KARDRQKLRK KLAKQLHQQQ HQLQLQLQQI KPKPMSSMMS QPVNNTIIDH HNPYHHHHHN 120
LHHNHHRPYD HMSFACCSHP SSMCLPHQGI GGETQSKVMN EYYCTNSGAE EILMQKSITG 180
PNSTYGRDWM MMMDMGPRPS YPSSSSPIPC CNMMMSSPKI PLKTLELFPI SSINSKQDST 240
KL*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor required to initiate organ founder cells in a lateral domain of shoot meristems. Involved in the lateral sepal axis-dependent development of flowers, probably by regulating the proliferation of L1 cells at the lateral region of flower primordia. Required for the formation of the margin cells of the first and second whorl organs. {ECO:0000269|PubMed:11751640, ECO:0000269|PubMed:15169755}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AB058920 | 0.0 | AB058920.1 Arabidopsis thaliana PRS mRNA for PRESSED FLOWER, complete cds. |
| GenBank | AY251397 | 0.0 | AY251397.1 Arabidopsis thaliana PRS/WOX3 protein mRNA, complete cds. |
| Publications
? help Back to Top |
- Chandler JW,Werr W
Arabidopsis floral phytomer development: auxin response relative to biphasic modes of organ initiation.
J. Exp. Bot., 2014. 65(12): p. 3097-110
[PMID:24744428] - Niu L, et al.
LOOSE FLOWER, a WUSCHEL-like Homeobox gene, is required for lateral fusion of floral organs in Medicago truncatula.
Plant J., 2015. 81(3): p. 480-92
[PMID:25492397] - Alvarez JP,Furumizu C,Efroni I,Eshed Y,Bowman JL
Active suppression of a leaf meristem orchestrates determinate leaf growth.
Elife, 2017.
[PMID:27710768] - Guan C, et al.
Spatial Auxin Signaling Controls Leaf Flattening in Arabidopsis.
Curr. Biol., 2017. 27(19): p. 2940-2950.e4
[PMID:28943086]
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