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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
479433 |
Common Name | ARALYDRAFT_479433 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family |
B3 |
Protein Properties |
Length: 276aa MW: 31469.6 Da PI: 9.4945 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
479433 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 53.3 | 4.9e-17 | 127 | 216 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
f k +++s+v+ +l lp +f+++h+ k ++ ++tl de+ ++ vk+ +k++ l++GW++F+ +++L +gD vvF+l+ r+ f +v ++r
479433 127 FTKPMLQSHVTGGFWLGLPLPFCKAHMPK--RDEMMTLVDEEDEESMVKYLAEKNG----LSGGWRGFAIDHQLVDGDAVVFQLITRTMF--KVYIIR 216
899***********************844..6679***************666666....************************998777..777776 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 276 aa
Download sequence Send
to blast |
MVESELSYEQ IRLKRVEENK KRMGELNLNK LAQSLRVSSS SSKPSPAKPR TMRIPVDFSE 60 VRRSSRAKGP PPSYKEFGLE PLERRPRRSS QRRDLLNRVY ASDDARMYAF DRAEKLQSSL 120 DPEFPSFTKP MLQSHVTGGF WLGLPLPFCK AHMPKRDEMM TLVDEEDEES MVKYLAEKNG 180 LSGGWRGFAI DHQLVDGDAV VFQLITRTMF KVYIIRVNED ANKDSDGNEE DEDNDNELNK 240 KQKENVSEAR QLRSSGKRKR GGNNVSNLSL PLVIS*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB493621 | 0.0 | AB493621.1 Arabidopsis thaliana At3g19184 mRNA for hypothetical protein, partial cds, clone: RAAt3g19184. |
GenBank | DQ487561 | 0.0 | DQ487561.1 Arabidopsis thaliana clone 0000004119_0000003454 unknown protein mRNA, complete cds. |