PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462969534
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family EIL
Protein Properties Length: 397aa    MW: 43625.5 Da    PI: 4.5496
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462969534genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3135.38.9e-42491632109
                XXXXXXXXXXXXXXXXXXXXXX..XXXXX........XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
       EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaa.......tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraW 94 
                +lkkrmwkdq ll++l++r+ +    k++           +++++++ ++rrk+m raQDg+L++Mlk+me+cna+GfvYg ++e+g pv+g+sdsLr+W
  462969534  49 DLKKRMWKDQLLLMKLEGRSGRDDDGKQKMacpgpdqPADQNEETPEARYRRKAMLRAQDGVLRHMLKMMEACNARGFVYGVVDESGVPVSGSSDSLRGW 148
                8*****************99887666666567777663444556999***************************************************** PP

                XXXXXXXXXXXXXXX CS
       EIN3  95 Wkekvefdrngpaai 109
                Wk++v fdr+gp+a+
  462969534 149 WKDDVGFDRAGPTAL 163
                ************997 PP
2EIN395.61.1e-29167239191263
                -.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX CS
       EIN3 191 gtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah 263
                g+ppy+kphdlkkawk+s+L+avikh+sp+++++r+l++qsk+lq+kmsa++ +++++v+ +ee++ ++v+  
  462969534 167 GPPPYRKPHDLKKAWKISLLSAVIKHLSPRFDQMRKLVWQSKRLQHKMSARDADTWARVIAREEALDRHVQRA 239
                59***************************************************************99888765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.9E-4449164No hitNo description
Gene3DG3DSA:1.10.3180.101.0E-31101238IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.44E-27102232IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
PfamPF048732.7E-25167230No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    Send to blast
MDDVDKPTKG KGKAGLTDDD DAAAPDSQDQ EELCFSDSES GSESIEIADL KKRMWKDQLL  60
LMKLEGRSGR DDDGKQKMAC PGPDQPADQN EETPEARYRR KAMLRAQDGV LRHMLKMMEA  120
CNARGFVYGV VDESGVPVSG SSDSLRGWWK DDVGFDRAGP TALLSGGPPP YRKPHDLKKA  180
WKISLLSAVI KHLSPRFDQM RKLVWQSKRL QHKMSARDAD TWARVIAREE ALDRHVQRAL  240
TITPLDDDGD DQDDAAGGDT PREAAHLDKR KRHGVVAGDE DASGGGEDAS GGGEMMLPLL  300
ALPDIEGVPE ADRNSIDELM KLYYRCLQGT DEGEQENGAA VVSADAGQRQ SGVGETAPAQ  360
DARLHDDMLD GLLSVAADVV DVRDFPNSPI WQWRFYD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A5e-2110723610130Protein ETHYLENE INSENSITIVE 3
4zds_B5e-2110723610130Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMap462969534
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAL6066362e-87AL606636.4 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21, complete sequence.
GenBankAP0149602e-87AP014960.1 Oryza sativa Japonica Group DNA, chromosome 4, cultivar: Nipponbare, complete sequence.
GenBankCP0126122e-87CP012612.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 4 sequence.
GenBankCR8551642e-87CR855164.1 Oryza sativa genomic DNA, chromosome 4, BAC clone: H0523F07, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015691482.11e-119PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLB9F0P71e-101B9F0P7_ORYSJ; Uncharacterized protein
STRINGPavir.Ga01473.1.p1e-118(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27050.12e-29ETHYLENE-INSENSITIVE3-like 1