 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
462968824 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
| Family |
LBD |
| Protein Properties |
Length: 209aa MW: 22155.8 Da PI: 6.9509 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462968824 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 84 | 2.2e-26 | 17 | 89 | 27 | 99 |
DUF260 27 pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99
+++fa+vhk+FGasnv+kll+++++e+r da+ +++yeA+ar+rdPvyG+v++i++lqqq+++l++el+ +++
462968824 17 AAHFAAVHKVFGASNVSKLLHQIRPEKRVDAVVTVCYEAQARLRDPVYGCVAHIFALQQQIMNLQSELSFMQS 89
579*****************************************************************99886 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 209 aa
Download sequence Send
to blast |
MSTCSSVMSG GGAGGGAAHF AAVHKVFGAS NVSKLLHQIR PEKRVDAVVT VCYEAQARLR 60
DPVYGCVAHI FALQQQIMNL QSELSFMQST LATMELPQQQ QAGQFPVQPQ MPVTAGAFSV 120
SNLPSSSTIL PNTVDLSALV FDNQHQQQQQ LQQNQYAAGM GASSGEASGS GTDTFTGDGT 180
DLHALARALL NRQHVRVAGT EPPQPRAHQ
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | BT036180 | 3e-70 | BT036180.1 Zea mays full-length cDNA clone ZM_BFb0099M02 mRNA, complete cds. |
