PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

462968516

Organism

Eragrostis tef

Taxonomic ID

110835

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis

Family

bZIP

Protein Properties

Length: 425aa MW: 47668.6 Da PI: 7.0355

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
462968516	genome	Tef	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	24.7	5.1e-08	13	42	2	31
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeL 31 ++ k rr+++NReAAr+sR+RKk e +L 462968516 13 PQHKTIRRLAQNREAARKSRLRKKLESSKL 42 567999******************999888 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	8.1E-5	9	43	No hit	No description
PROSITE pattern	PS00036	0	19	34	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	1.8E-30	124	199	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence Send to blast
MESQFDQASQ QQPQHKTIRR LAQNREAARK SRLRKKLESS KLKLAQMEQD IQRARAHGLL 60 LGGAPGANTS SGAYLQFLNL LIINVFRGYS PQVPSCLIVL WYPWAGAAMF DLEYARWLDD 120 HGRHMAELRG ALQAHLQDGD LRAIVDDTLT HHDELFRLKA MAAKSDVFHL ITGVWVSPAE 180 RCFLWMGGFR PSDLLKTLVP QLDPLTEQQV VGICNLQQSS QQAEEALSQG LEQLHQSLAT 240 TMAGGSLSEE TDMSFMGQMA LALSKLSNLE GFVIQHDFVE HNFEREDGKN YFPNPVKDSN 300 ERRANSFLMN LFTIAYDRAS IKKGPNSIID QTGNLPVEFF PKIQGTLMAV WDAKVMIQAT 360 KQVARTGYVT VLRPIFHRPT EVTRRAVAAM PVTLDIPIVE HFCFIIKAES ASMLSSADAL 420 DSCHY

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence Send to blast

MESQFDQASQ QQPQHKTIRR LAQNREAARK SRLRKKLESS KLKLAQMEQD IQRARAHGLL  60
LGGAPGANTS SGAYLQFLNL LIINVFRGYS PQVPSCLIVL WYPWAGAAMF DLEYARWLDD  120
HGRHMAELRG ALQAHLQDGD LRAIVDDTLT HHDELFRLKA MAAKSDVFHL ITGVWVSPAE  180
RCFLWMGGFR PSDLLKTLVP QLDPLTEQQV VGICNLQQSS QQAEEALSQG LEQLHQSLAT  240
TMAGGSLSEE TDMSFMGQMA LALSKLSNLE GFVIQHDFVE HNFEREDGKN YFPNPVKDSN  300
ERRANSFLMN LFTIAYDRAS IKKGPNSIID QTGNLPVEFF PKIQGTLMAV WDAKVMIQAT  360
KQVARTGYVT VLRPIFHRPT EVTRRAVAAM PVTLDIPIVE HFCFIIKAES ASMLSSADAL  420
DSCHY

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in defense response. {ECO:0000250\|UniProtKB:Q7X993}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	462968516

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021302319.1	1e-133	transcription factor TGAL4 isoform X1
Refseq	XP_021302320.1	1e-133	transcription factor TGAL4 isoform X1
Refseq	XP_021302323.1	1e-134	transcription factor TGAL4 isoform X5
Swissprot	Q53Q70	1e-115	TGAL4_ORYSJ; Transcription factor TGAL4
TrEMBL	A0A2T7CKD7	1e-131	A0A2T7CKD7_9POAL; Uncharacterized protein
TrEMBL	A0A3L6PJL3	1e-130	A0A3L6PJL3_PANMI; Transcription factor HBP-1b(C38)-like
STRING	Pavir.Ha01753.1.p	1e-136	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4444	36	70

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.2	3e-64	bZIP family protein

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Chern M, et al. Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins. BMC Genomics, 2014. 15: p. 461 [PMID:24919709] Miyamoto K, et al. Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells. J. Plant Physiol., 2015. 173: p. 19-27 [PMID:25462074]