PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

462967105

Organism

Eragrostis tef

Taxonomic ID

110835

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis

Family

bHLH

Protein Properties

Length: 442aa MW: 48828 Da PI: 5.9418

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
462967105	genome	Tef	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.2	1.1e-11	283	331	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++iN+++ L++l+P + +k Ka++L + ++Y++sLq 462967105 283 NSHSLAERFRREKINERMKLLQDLVPGC----NKITGKAMMLDEIINYVQSLQ 331 58************************....999***************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	1.66E-11	278	335	No hit	No description
SuperFamily	SSF47459	1.57E-17	278	347	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.1E-17	280	347	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	15.796	280	330	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	3.6E-9	283	331	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	2.3E-10	286	336	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence Send to blast
IELIFKQRKT NAAIQNLLTV RLNHLGYLGD TTSTMEPKRY SRNANKPLQI SGQREQESNS 60 LTIHLYLWQD SLLQLFALTV LFGVQPPTGF TRIHPHYYCS TIILAAETSP EGWDEQVTAE 120 LVIRRGGTGE SSSPNIRTGI DCPAPDLLHP LSKAPSMYSS PCTDPGRDEE QCFEIGANLL 180 TSLDHAMDFE EPIVFPMHNV GLQDEIVSAS DTQPSRNMST GKCLKGGKRK GSGEDSTVYS 240 QVETAAGSQQ EVSMERADEK AGTGDTNKED YVHVRAKRGQ ATNSHSLAER FRREKINERM 300 KLLQDLVPGC NKITGKAMML DEIINYVQSL QRQVEFLSMK LSAISPELNC NINLQDILCS 360 RDAICAFPGY GPQMSNVHLS LYRASQQGFS PGIIPNPANV HVMRTAQLSA FPQRGVWDED 420 LRNMAPEPFA SDAGAGSIES SH

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence Send to blast

IELIFKQRKT NAAIQNLLTV RLNHLGYLGD TTSTMEPKRY SRNANKPLQI SGQREQESNS  60
LTIHLYLWQD SLLQLFALTV LFGVQPPTGF TRIHPHYYCS TIILAAETSP EGWDEQVTAE  120
LVIRRGGTGE SSSPNIRTGI DCPAPDLLHP LSKAPSMYSS PCTDPGRDEE QCFEIGANLL  180
TSLDHAMDFE EPIVFPMHNV GLQDEIVSAS DTQPSRNMST GKCLKGGKRK GSGEDSTVYS  240
QVETAAGSQQ EVSMERADEK AGTGDTNKED YVHVRAKRGQ ATNSHSLAER FRREKINERM  300
KLLQDLVPGC NKITGKAMML DEIINYVQSL QRQVEFLSMK LSAISPELNC NINLQDILCS  360
RDAICAFPGY GPQMSNVHLS LYRASQQGFS PGIIPNPANV HVMRTAQLSA FPQRGVWDED  420
LRNMAPEPFA SDAGAGSIES SH

Cis-element ? help Back to Top
Source	Link
PlantRegMap	462967105

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002468224.2	1e-150	transcription factor bHLH74 isoform X1
Refseq	XP_021317580.1	1e-150	transcription factor bHLH74 isoform X1
Refseq	XP_021317585.1	1e-150	transcription factor bHLH74 isoform X1
TrEMBL	A0A0A9JML8	1e-162	A0A0A9JML8_ARUDO; Uncharacterized protein
STRING	Sb01g042070.1	1e-150	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4536	29	33

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	9e-45	bHLH family protein