PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

462966341

Organism

Eragrostis tef

Taxonomic ID

110835

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis

Family

bZIP

Protein Properties

Length: 479aa MW: 52711.9 Da PI: 6.7422

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
462966341	genome	Tef	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.8	1.7e-11	175	203	5	33
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee 33 k rr+++NReAAr+sR+RKka+i++Le 462966341 175 KTVRRLAQNREAARKSRLRKKAYIQQLES 203 5679***********************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	5.6E-7	171	234	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	8.829	173	217	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.4E-7	173	216	No hit	No description
Pfam	PF00170	1.4E-8	175	204	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.86E-7	175	208	No hit	No description
PROSITE pattern	PS00036	0	178	193	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	9.4E-29	255	328	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence Send to blast
MDETSSSSSH PRQDPCVLAG YGFHGAMGNS MPPANFFDQE GATYFGELEE AFIHQAPTFR 60 RTQQAAGTST PHHGDTTLFP IAATATAAAR PVPTLDIFPS WPMRSPHTPK EVSNVTAGST 120 GSESSSKNSS DHSDQLGTAA NMASHLDQVS QQQEPQHKNI ATSSTQRNGK TLDPKTVRRL 180 AQNREAARKS RLRKKAYIQQ LESSKLKLAQ MEHDIQRARA QGLLLGGASA ANTSSGAAMF 240 DMEYTRWLDD HGRRMAELHR ALHAHLQDSE LRVIVDDTLT HHEELFHLKA SAVKSDVFHL 300 IIGVWTSPAE RCFLWMGGFR PSDLLKTLLP QLDPLTEQQV ISICNLQQSS QQAEEALSQG 360 LEQLHQSLSD TMAGGSAIDD ANTSFMGQMA LALDKLSNLE GFVIQADNLR QQTLHQMHRI 420 LTVRQAARCF LAIGEYHNRL RALSSLWASR PREILMADEG NCGDQSVVAQ PSPNQYSAF

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence Send to blast

MDETSSSSSH PRQDPCVLAG YGFHGAMGNS MPPANFFDQE GATYFGELEE AFIHQAPTFR  60
RTQQAAGTST PHHGDTTLFP IAATATAAAR PVPTLDIFPS WPMRSPHTPK EVSNVTAGST  120
GSESSSKNSS DHSDQLGTAA NMASHLDQVS QQQEPQHKNI ATSSTQRNGK TLDPKTVRRL  180
AQNREAARKS RLRKKAYIQQ LESSKLKLAQ MEHDIQRARA QGLLLGGASA ANTSSGAAMF  240
DMEYTRWLDD HGRRMAELHR ALHAHLQDSE LRVIVDDTLT HHEELFHLKA SAVKSDVFHL  300
IIGVWTSPAE RCFLWMGGFR PSDLLKTLLP QLDPLTEQQV ISICNLQQSS QQAEEALSQG  360
LEQLHQSLSD TMAGGSAIDD ANTSFMGQMA LALDKLSNLE GFVIQADNLR QQTLHQMHRI  420
LTVRQAARCF LAIGEYHNRL RALSSLWASR PREILMADEG NCGDQSVVAQ PSPNQYSAF

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in defense response. {ECO:0000250\|UniProtKB:Q7X993}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00131	DAP	Transfer from AT1G08320	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	462966341

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025809311.1	0.0	transcription factor TGAL4-like isoform X2
Refseq	XP_025828229.1	0.0	transcription factor TGAL4-like isoform X1
Swissprot	Q53Q70	0.0	TGAL4_ORYSJ; Transcription factor TGAL4
TrEMBL	A0A2T7E565	0.0	A0A2T7E565_9POAL; Uncharacterized protein
STRING	Sb05g003240.1	0.0	(Sorghum bicolor)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4444	36	70

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.3	1e-121	bZIP family protein

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Chern M, et al. Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins. BMC Genomics, 2014. 15: p. 461 [PMID:24919709] Miyamoto K, et al. Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells. J. Plant Physiol., 2015. 173: p. 19-27 [PMID:25462074]