PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 462966283 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
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Family | CAMTA | ||||||||
Protein Properties | Length: 679aa MW: 75003.6 Da PI: 7.0667 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 165.9 | 6.9e-52 | 32 | 147 | 3 | 117 |
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywl 101 e +rw +++ei+a+L+n++k++++ ++ ++p sg+++Ly+rk+vr+frkDG++wkkkkdgktv+E+hekLK+g+ e +++yYa++e++p+f rrcywl 462966283 32 AEaASRWFRPNEIYAVLANHAKFQVVPQPIDKPVSGTVVLYDRKVVRNFRKDGHNWKKKKDGKTVQEAHEKLKIGNEEKVHVYYARGEDDPNFFRRCYWL 131 44489*********************************************************************************************** PP CG-1 102 Leeelekivlvhylev 117 L++ele+ivlvhy+++ 462966283 132 LDKELERIVLVHYRQT 147 *************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51437 | 73.891 | 27 | 153 | IPR005559 | CG-1 DNA-binding domain |
SMART | SM01076 | 6.6E-63 | 30 | 148 | IPR005559 | CG-1 DNA-binding domain |
Pfam | PF03859 | 2.7E-44 | 34 | 146 | IPR005559 | CG-1 DNA-binding domain |
SuperFamily | SSF81296 | 1.32E-5 | 291 | 360 | IPR014756 | Immunoglobulin E-set |
SuperFamily | SSF48403 | 1.1E-17 | 418 | 570 | IPR020683 | Ankyrin repeat-containing domain |
CDD | cd00204 | 6.19E-17 | 438 | 566 | No hit | No description |
Gene3D | G3DSA:1.25.40.20 | 2.2E-18 | 458 | 606 | IPR020683 | Ankyrin repeat-containing domain |
PROSITE profile | PS50297 | 18.802 | 474 | 578 | IPR020683 | Ankyrin repeat-containing domain |
Pfam | PF12796 | 1.2E-8 | 480 | 570 | IPR020683 | Ankyrin repeat-containing domain |
PROSITE profile | PS50088 | 11.808 | 507 | 539 | IPR002110 | Ankyrin repeat |
SMART | SM00248 | 6.3E-6 | 507 | 536 | IPR002110 | Ankyrin repeat |
SMART | SM00248 | 270 | 546 | 575 | IPR002110 | Ankyrin repeat |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0005515 | Molecular Function | protein binding | ||||
GO:0005515 | Molecular Function | protein binding | ||||
GO:0005515 | Molecular Function | protein binding | ||||
GO:0005515 | Molecular Function | protein binding | ||||
GO:0005515 | Molecular Function | protein binding | ||||
GO:0005515 | Molecular Function | protein binding | ||||
GO:0005515 | Molecular Function | protein binding | ||||
GO:0005515 | Molecular Function | protein binding | ||||
GO:0005515 | Molecular Function | protein binding | ||||
GO:0005515 | Molecular Function | protein binding | ||||
GO:0005515 | Molecular Function | protein binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 679 aa Download sequence Send to blast |
MAGGASGRDP LVASEIHGFL TCADLNFEKL MAEAASRWFR PNEIYAVLAN HAKFQVVPQP 60 IDKPVSGTVV LYDRKVVRNF RKDGHNWKKK KDGKTVQEAH EKLKIGNEEK VHVYYARGED 120 DPNFFRRCYW LLDKELERIV LVHYRQTSEE NTIPPPNTEP GVAEMPPINL IHYSSPLTST 180 YSASARTEHS CAAAAAPEEI NSHRGGAISC ESDDPESSLE LFWADLLESS MKNDTSVCGG 240 SLTSNQHAKY GTGDSGNNNF VSTNATNNVI FSSTVDVHSE AYATNPSLNQ VLVVGNFHEQ 300 YRHLNTNVHC VIGDKIVAAE TVQSGVYRFM ATPHTPGRVN LFLTLDGKTP ISEVLSFDYR 360 TMPGSSSDSE LSSVEDEPNK SKLQMQMRLA RLLFSANKKK LAPKFLVEGS KVSNLLSASA 420 EKEWMDLLKF ITDSKGPYVA ATEGLLELML RNRLQEWLIE KIVEGHKSTG RDDLGQGPIH 480 LCSFLGYTWA IRLFSLSGFS LDFRDSSGWT ALHWAAYYGR EKMVAALLSA GANPSLVTDP 540 TPGAPGGYTA ADLAARQGYD GLAAYLAEKG LTAHFEAMSL SKDTGRSTSR TKSMKQQTKE 600 FETLSEQELC LKESLAAYRN AADAASNIQA ALRERTLKLQ TKAIQLANPE TEAAAIVAAM 660 RIQHAFRNYN RKITTIERK |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds calmodulin in a calcium-dependent manner in vitro. Binds to the DNA consensus sequence 5'-T[AC]CG[CT]GT[GT][GT][GT][GT]T[GT]CG-3'. {ECO:0000269|PubMed:16192280}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 462966283 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020186933.1 | 0.0 | calmodulin-binding transcription activator 5 | ||||
Swissprot | Q7XHR2 | 0.0 | CBT_ORYSJ; Calmodulin-binding transcription activator CBT | ||||
TrEMBL | A0A3B6AX18 | 0.0 | A0A3B6AX18_WHEAT; Uncharacterized protein | ||||
TrEMBL | A0A446KWW8 | 0.0 | A0A446KWW8_TRITD; Uncharacterized protein | ||||
TrEMBL | A0A446KWX8 | 0.0 | A0A446KWX8_TRITD; Uncharacterized protein | ||||
STRING | Traes_2AS_4C4190DEB.2 | 0.0 | (Triticum aestivum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP9831 | 29 | 33 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16940.1 | 1e-101 | calmodulin binding;transcription regulators |