PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462966283
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family CAMTA
Protein Properties Length: 679aa    MW: 75003.6 Da    PI: 7.0667
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462966283genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1165.96.9e-52321473117
       CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywl 101
                 e  +rw +++ei+a+L+n++k++++ ++ ++p sg+++Ly+rk+vr+frkDG++wkkkkdgktv+E+hekLK+g+ e +++yYa++e++p+f rrcywl
  462966283  32 AEaASRWFRPNEIYAVLANHAKFQVVPQPIDKPVSGTVVLYDRKVVRNFRKDGHNWKKKKDGKTVQEAHEKLKIGNEEKVHVYYARGEDDPNFFRRCYWL 131
                44489*********************************************************************************************** PP

       CG-1 102 Leeelekivlvhylev 117
                L++ele+ivlvhy+++
  462966283 132 LDKELERIVLVHYRQT 147
                *************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143773.89127153IPR005559CG-1 DNA-binding domain
SMARTSM010766.6E-6330148IPR005559CG-1 DNA-binding domain
PfamPF038592.7E-4434146IPR005559CG-1 DNA-binding domain
SuperFamilySSF812961.32E-5291360IPR014756Immunoglobulin E-set
SuperFamilySSF484031.1E-17418570IPR020683Ankyrin repeat-containing domain
CDDcd002046.19E-17438566No hitNo description
Gene3DG3DSA:1.25.40.202.2E-18458606IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029718.802474578IPR020683Ankyrin repeat-containing domain
PfamPF127961.2E-8480570IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5008811.808507539IPR002110Ankyrin repeat
SMARTSM002486.3E-6507536IPR002110Ankyrin repeat
SMARTSM00248270546575IPR002110Ankyrin repeat
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0005634Cellular Componentnucleus
GO:0005634Cellular Componentnucleus
GO:0005634Cellular Componentnucleus
GO:0005634Cellular Componentnucleus
GO:0005634Cellular Componentnucleus
GO:0005634Cellular Componentnucleus
GO:0005634Cellular Componentnucleus
GO:0005634Cellular Componentnucleus
GO:0005634Cellular Componentnucleus
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003677Molecular FunctionDNA binding
GO:0003677Molecular FunctionDNA binding
GO:0003677Molecular FunctionDNA binding
GO:0003677Molecular FunctionDNA binding
GO:0003677Molecular FunctionDNA binding
GO:0003677Molecular FunctionDNA binding
GO:0003677Molecular FunctionDNA binding
GO:0003677Molecular FunctionDNA binding
GO:0003677Molecular FunctionDNA binding
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
GO:0005515Molecular Functionprotein binding
GO:0005515Molecular Functionprotein binding
GO:0005515Molecular Functionprotein binding
GO:0005515Molecular Functionprotein binding
GO:0005515Molecular Functionprotein binding
GO:0005515Molecular Functionprotein binding
GO:0005515Molecular Functionprotein binding
GO:0005515Molecular Functionprotein binding
GO:0005515Molecular Functionprotein binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 679 aa     Download sequence    Send to blast
MAGGASGRDP LVASEIHGFL TCADLNFEKL MAEAASRWFR PNEIYAVLAN HAKFQVVPQP  60
IDKPVSGTVV LYDRKVVRNF RKDGHNWKKK KDGKTVQEAH EKLKIGNEEK VHVYYARGED  120
DPNFFRRCYW LLDKELERIV LVHYRQTSEE NTIPPPNTEP GVAEMPPINL IHYSSPLTST  180
YSASARTEHS CAAAAAPEEI NSHRGGAISC ESDDPESSLE LFWADLLESS MKNDTSVCGG  240
SLTSNQHAKY GTGDSGNNNF VSTNATNNVI FSSTVDVHSE AYATNPSLNQ VLVVGNFHEQ  300
YRHLNTNVHC VIGDKIVAAE TVQSGVYRFM ATPHTPGRVN LFLTLDGKTP ISEVLSFDYR  360
TMPGSSSDSE LSSVEDEPNK SKLQMQMRLA RLLFSANKKK LAPKFLVEGS KVSNLLSASA  420
EKEWMDLLKF ITDSKGPYVA ATEGLLELML RNRLQEWLIE KIVEGHKSTG RDDLGQGPIH  480
LCSFLGYTWA IRLFSLSGFS LDFRDSSGWT ALHWAAYYGR EKMVAALLSA GANPSLVTDP  540
TPGAPGGYTA ADLAARQGYD GLAAYLAEKG LTAHFEAMSL SKDTGRSTSR TKSMKQQTKE  600
FETLSEQELC LKESLAAYRN AADAASNIQA ALRERTLKLQ TKAIQLANPE TEAAAIVAAM  660
RIQHAFRNYN RKITTIERK
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds calmodulin in a calcium-dependent manner in vitro. Binds to the DNA consensus sequence 5'-T[AC]CG[CT]GT[GT][GT][GT][GT]T[GT]CG-3'. {ECO:0000269|PubMed:16192280}.
Cis-element ? help Back to Top
SourceLink
PlantRegMap462966283
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020186933.10.0calmodulin-binding transcription activator 5
SwissprotQ7XHR20.0CBT_ORYSJ; Calmodulin-binding transcription activator CBT
TrEMBLA0A3B6AX180.0A0A3B6AX18_WHEAT; Uncharacterized protein
TrEMBLA0A446KWW80.0A0A446KWW8_TRITD; Uncharacterized protein
TrEMBLA0A446KWX80.0A0A446KWX8_TRITD; Uncharacterized protein
STRINGTraes_2AS_4C4190DEB.20.0(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP98312933
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16940.11e-101calmodulin binding;transcription regulators