PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 462964265
Organism
Eragrostis tef
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
Family ERF
Protein Properties Length: 120aa    MW: 13166.1 Da    PI: 10.1979
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
462964265genomeTefView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP244.15e-143483254
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
               +ykGV+ ++  g+W ++Irdp +   r + +lg+++t+eeA  a++aa++ l+
  462964265 34 RYKGVTKCP-GGKWGSYIRDPAS--TRLKMWLGTYDTPEEAVCAYDAAARTLR 83
               7********.8*********843..359*********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003806.0E-183497IPR001471AP2/ERF domain
CDDcd000181.04E-173493No hitNo description
SuperFamilySSF541711.18E-153491IPR016177DNA-binding domain
PROSITE profilePS5103216.2653491IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.5E-193492IPR001471AP2/ERF domain
PRINTSPR003672.3E-53546IPR001471AP2/ERF domain
PRINTSPR003672.3E-55874IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    Send to blast
MERGIVGFAK KIAAAMAANA VPHEVQGETP SPRRYKGVTK CPGGKWGSYI RDPASTRLKM  60
WLGTYDTPEE AVCAYDAAAR TLRPGSRTNF PELAGEEEKR HAVVLEHVAG VKRKRANRLC
Cis-element ? help Back to Top
SourceLink
PlantRegMap462964265
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011094418.13e-14ethylene-responsive transcription factor 13-like
RefseqXP_021634710.14e-14ethylene-responsive transcription factor CRF4-like
TrEMBLA0A0D3DZJ32e-14A0A0D3DZJ3_BRAOL; Uncharacterized protein
STRINGBo9g001020.13e-15(Brassica oleracea)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1971958
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11140.12e-15cytokinin response factor 1