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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
462960139 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
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| Family |
Trihelix |
| Protein Properties |
Length: 271aa MW: 29843 Da PI: 9.4526 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 462960139 | genome | Tef | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 49.3 | 1.3e-15 | 36 | 128 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlr...rgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
W+++ + L++a+ e+ l+ r+ l ++We+v +++ r+ g ++s +qCk+k+enl+kryk++ + ++ ++ss++p+f+++e
462960139 36 WSEEAICSLLDAYIERLGGLGqliRKYLTRQDWEDVTAAVtkqhraRDAGGSKSVEQCKNKIENLKKRYKAECTKIADG-RRASSNWPWFKKME 128
**************9999999444588******************999**********************988888887.57778********7 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 271 aa
Download sequence Send
to blast |
MLASTAPTST VGNKKGRGRG GASSPRAEFL DNREGWSEEA ICSLLDAYIE RLGGLGQLIR 60
KYLTRQDWED VTAAVTKQHR ARDAGGSKSV EQCKNKIENL KKRYKAECTK IADGRRASSN 120
WPWFKKMELI LGTTGDIASP NPAFSTSDEK PRLQQEQNNE RMMASVMNAV LLKASLAQIG 180
IETRVQTSLM MQDATEPYIR RQAIRHLEKG RVVIFGGTGT SMGNPLFTTD TAAALRASEI 240
VPFDMLEPGN ISRALCGDQR PEVVMYNSCA P
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 4a7w_A | 4e-23 | 162 | 240 | 80 | 155 | URIDYLATE KINASE |
| 4a7w_B | 4e-23 | 162 | 240 | 80 | 155 | URIDYLATE KINASE |
| 4a7x_A | 4e-23 | 162 | 240 | 80 | 155 | URIDYLATE KINASE |
| 4a7x_B | 4e-23 | 162 | 240 | 80 | 155 | URIDYLATE KINASE |
| 4a7x_C | 4e-23 | 162 | 240 | 80 | 155 | URIDYLATE KINASE |
| 4a7x_D | 4e-23 | 162 | 240 | 80 | 155 | URIDYLATE KINASE |
| 4a7x_E | 4e-23 | 162 | 240 | 80 | 155 | URIDYLATE KINASE |
| 4a7x_F | 4e-23 | 162 | 240 | 80 | 155 | URIDYLATE KINASE |
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