|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
462956801 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Eragrostideae; Eragrostidinae; Eragrostis
|
Family |
B3 |
Protein Properties |
Length: 248aa MW: 27645.8 Da PI: 10.7859 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
462956801 | genome | Tef | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 103.2 | 1.5e-32 | 35 | 132 | 1 | 90 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90
f+k+ tpsdv+k++rlv+pk++ae+h g + +++ l +ed g++W+++++y+++s++yvltkGW++Fv+++gL++gD++vF+++ e+
462956801 35 FDKTVTPSDVGKLNRLVIPKQHAEKHfplqlpsAGGESKGVLLNFEDAAGKVWRFRYSYWNSSQSYVLTKGWSRFVREKGLRAGDTIVFSHSTYgPEK 132
89*******************************5556799**************************************************87554444 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 248 aa
Download sequence Send
to blast |
MRRTRALVPL QTPSRGHHSL ASPPSPAAVA REHLFDKTVT PSDVGKLNRL VIPKQHAEKH 60 FPLQLPSAGG ESKGVLLNFE DAAGKVWRFR YSYWNSSQSY VLTKGWSRFV REKGLRAGDT 120 IVFSHSTYGP EKQLFIDCKK SKSTPTTEAA PSPSPMEKPK EARVVVRLFG VDIAGDGCQK 180 RGRPLEVALE QGQQFFKKQC MAQHHTPALG ALLLSKNQQA IDMLKSPWSR RSMEAIRTFL 240 QESRVTAA
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | BT017462 | 1e-113 | BT017462.1 Zea mays clone EL01N0407E07.c mRNA sequence. |
GenBank | EU969519 | 1e-113 | EU969519.1 Zea mays clone 331400 DNA-binding protein RAV1 mRNA, complete cds. |
GenBank | KJ727870 | 1e-113 | KJ727870.1 Zea mays clone pUT5962 AP2-EREBP transcription factor (EREB126) gene, partial cds. |